RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 EBLN2Q6P2I7 272 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 FOXI2Q6ZQN5 318 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 ZNF546Q86UE3 836 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 OR4B1Q8NGF8 309 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 UHRF2Q96PU4 802 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 SHANK2-AS3Q9BTD1 123 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 C1QTNF4Q9BXJ3 329 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 C11orf68Q9H3H3 251 aaKnown RBP11.42□□□□□ -0.58
HDAC6-218ENST00000470942 SAV1Q9H4B6 383 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-218ENST00000470942 C11orf1Q9H5F2 150 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 RPRMQ9NS64 109 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 XCL2Q9UBD3 114 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 SACSQ9NZJ4 4579 aa11.41□□□□□ -0.58
HDAC6-218ENST00000470942 NUPR2A6NF83 97 aa11.41□□□□□ -0.58
HDAC6-218ENST00000470942 PRAF2O60831 178 aa11.41□□□□□ -0.58
HDAC6-218ENST00000470942 IL15RAQ13261 267 aa11.41□□□□□ -0.58
HDAC6-218ENST00000470942 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.41□□□□□ -0.58
HDAC6-218ENST00000470942 ARV1Q9H2C2 271 aa11.41□□□□□ -0.58
HDAC6-218ENST00000470942 LYRM2Q9NU23 88 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-218ENST00000470942 IGHV4-28A0A0C4DH34 117 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 F6UB75 175 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 MIFP14174 115 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 RPL7P18124 248 aaKnown RBP11.4□□□□□ -0.58
HDAC6-218ENST00000470942 SULT1A1P50225 295 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 FXYD7P58549 80 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 NANOS2P60321 138 aaKnown RBP11.4□□□□□ -0.58
HDAC6-218ENST00000470942 RAB31Q13636 194 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 PXDC1Q5TGL8 231 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 CEMP1Q6PRD7 247 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-218ENST00000470942 PATE2Q6UY27 113 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 STX12Q86Y82 276 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 C20orf173Q96LM9 149 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 C17orf77Q96MU5 243 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 MGST2Q99735 147 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 UQCC1Q9NVA1 299 aa11.4□□□□□ -0.58
HDAC6-218ENST00000470942 KLK5Q9Y337 293 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-218ENST00000470942 PLECQ15149 4684 aaKnown RBP11.4□□□□□ -0.58
HDAC6-218ENST00000470942 IGSF23A1L1A6 192 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 ZNF705EA8MWA4 302 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-218ENST00000470942 COX7A2P2O60397 106 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 RLN2P04090 185 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 S100A11P31949 105 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 CAMLGP49069 296 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 TMEM252Q8N6L7 170 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 Q8NAQ8 132 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 PHLDA1Q8WV24 401 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-218ENST00000470942 MFFQ9GZY8 342 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 X6R8D5 127 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 RYR2Q92736 4967 aa11.39□□□□□ -0.59
HDAC6-218ENST00000470942 A0A0J9YX75 114 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
HDAC6-218ENST00000470942 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 HBG1P69891 147 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 HBG2P69892 147 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 PSG9Q00887 426 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
HDAC6-218ENST00000470942 FAM78BQ5VT40 261 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 LINC00305Q7Z4B0 112 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 LRRC20Q8TCA0 184 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 MARVELD1Q9BSK0 173 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 RNF24Q9Y225 148 aa11.38□□□□□ -0.59
HDAC6-218ENST00000470942 TRAV8-2A0A0B4J237 113 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 UBE2L5PA0A1B0GUS4 154 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 SSNA1O43805 119 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 BAXQ07812 192 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 LRRC37A5PQ49AS3 106 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 Q6ZRG5 221 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 RNF182Q8N6D2 247 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 CLUHP3Q96NS8 147 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 NMES1Q9C002 83 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 SLC35B3Q9H1N7 401 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
HDAC6-218ENST00000470942 ELOA3CA0A087WX78 387 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-218ENST00000470942 CYCSP99999 105 aaKnown RBP11.36□□□□□ -0.59
HDAC6-218ENST00000470942 ATP6V1FQ16864 119 aa11.36□□□□□ -0.59
HDAC6-218ENST00000470942 C10orf113Q5VZT2 155 aa11.36□□□□□ -0.59
HDAC6-218ENST00000470942 MIC13Q5XKP0 118 aa11.36□□□□□ -0.59
HDAC6-218ENST00000470942 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
HDAC6-218ENST00000470942 TMEM37Q8WXS4 190 aa11.36□□□□□ -0.59
HDAC6-218ENST00000470942 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 A0A087X0K7 114 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 E5RGE8 158 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 FGF7P21781 194 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 VWC2Q2TAL6 325 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 SLC25A31Q9H0C2 315 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 DNAJC4Q9NNZ3 241 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 OR5AC2Q9NZP5 309 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
HDAC6-218ENST00000470942 DUSP14O95147 198 aaKnown RBP11.34□□□□□ -0.59
HDAC6-218ENST00000470942 SNRPCP09234 159 aaKnown RBP11.34□□□□□ -0.59
HDAC6-218ENST00000470942 ZNF705DP0CH99 300 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-218ENST00000470942 ZNF705BP0CI00 300 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-218ENST00000470942 HLA-DMBP28068 263 aa11.34□□□□□ -0.59
HDAC6-218ENST00000470942 NHLH2Q02577 135 aa11.34□□□□□ -0.59
HDAC6-218ENST00000470942 BPIFA4PQ86YQ2 179 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms