RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CCDC190Q86UF4 302 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 UBE2DNLQ8IWF7 75 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 IGF2BP2-AS1Q96M15 143 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 TMEM208Q9BTX3 173 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 TEX48A0A1B0GUV7 120 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 C9orf170A2RU37 121 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 ZNF705GA8MUZ8 300 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-210ENST00000469897 IL5P05113 134 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 CNN1P51911 297 aaKnown RBP9.42□□□□□ -0.9
CPSF4-210ENST00000469897 OXA1LQ15070 435 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 LGALS9BQ3B8N2 356 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 CYP2G1PQ6ZSU1 146 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 ACOT7LQ6ZUV0 252 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 TMEM144Q7Z5S9 345 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 DEDD2Q8WXF8 326 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 GPR82Q96P67 336 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 FLVCR2Q9UPI3 526 aa9.42□□□□□ -0.9
CPSF4-210ENST00000469897 DNAH2Q9P225 4427 aa9.41□□□□□ -0.9
CPSF4-210ENST00000469897 A8MTW9 85 aa9.41□□□□□ -0.9
CPSF4-210ENST00000469897 M0R2Z0 102 aa9.41□□□□□ -0.9
CPSF4-210ENST00000469897 CRXO43186 299 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-210ENST00000469897 DUSP14O95147 198 aaKnown RBP9.41□□□□□ -0.9
CPSF4-210ENST00000469897 DAD1P61803 113 aa9.41□□□□□ -0.9
CPSF4-210ENST00000469897 BAK1Q16611 211 aa9.41□□□□□ -0.9
CPSF4-210ENST00000469897 SPINK13Q1W4C9 94 aa9.41□□□□□ -0.9
CPSF4-210ENST00000469897 OR11H7Q8NGC8 314 aa9.41□□□□□ -0.9
CPSF4-210ENST00000469897 SLC25A39Q9BZJ4 359 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-210ENST00000469897 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
CPSF4-210ENST00000469897 LINC00854A0A1B0GVQ3 168 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 PMS2P5A8MQ11 134 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 H3BRN7 92 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 HYPMO75409 117 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 CCNKO75909 580 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 OR5G3P0C626 314 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 PRB4P10163 310 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-210ENST00000469897 AZU1P20160 251 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 S100A7P31151 101 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 RAP2BP61225 183 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 RRAS2P62070 204 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-210ENST00000469897 TMEM88Q6PEY1 159 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 SMIM8Q96KF7 97 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 SHANK2-AS3Q9BTD1 123 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 SRRQ9GZT4 340 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 HIGD1AQ9Y241 93 aa9.4□□□□□ -0.9
CPSF4-210ENST00000469897 TRAV12-2A0A075B6T6 113 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 SSSCA1O60232 199 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 NDUFB6O95139 128 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 OR4E1P0C645 316 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 INPP1P49441 399 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 UBE2MP61081 183 aaKnown RBP9.39□□□□□ -0.91
CPSF4-210ENST00000469897 FCN2Q15485 313 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 RNF212Q495C1 297 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 ZNF738Q8NE65 137 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 LRRC20Q8TCA0 184 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 UHRF2Q96PU4 802 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 NPVFQ9HCQ7 196 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 FAT2Q9NYQ8 4349 aa9.39□□□□□ -0.91
CPSF4-210ENST00000469897 KIAA1109Q2LD37 5005 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 METTL15P1P0C7V9 234 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 LINC00869P0C866 280 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 DEFB130BP0DP73 79 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 DEFB130AP0DP74 79 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
CPSF4-210ENST00000469897 RHOBP62745 196 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 SPANXN2Q5MJ10 180 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 PATE2Q6UY27 113 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 Q6ZR54 194 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 BAP18Q8IXM2 172 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 LINC01587Q99440 93 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 PPP1R14DQ9NXH3 145 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 DNAH17Q9UFH2 4485 aa9.38□□□□□ -0.91
CPSF4-210ENST00000469897 NAP1L6A6NFF2 107 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 SCGB1D2O95969 90 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 INSP01308 110 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 SNRPCP09234 159 aaKnown RBP9.37□□□□□ -0.91
CPSF4-210ENST00000469897 HTN1P15515 57 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 CXCL3P19876 107 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 ANXA7P20073 488 aaKnown RBP9.37□□□□□ -0.91
CPSF4-210ENST00000469897 PLP1P60201 277 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 SELENOTP62341 195 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 DLK1P80370 383 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 HIST1H1AQ02539 215 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-210ENST00000469897 PSG3Q16557 428 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 TRIQKQ629K1 86 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 TMEM14EPQ6UXP3 125 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 GSKIPQ9P0R6 139 aa9.37□□□□□ -0.91
CPSF4-210ENST00000469897 LYRM9A8MSI8 78 aa9.36□□□□□ -0.91
CPSF4-210ENST00000469897 MED14OSP0DP75 135 aa9.36□□□□□ -0.91
CPSF4-210ENST00000469897 B2MP61769 119 aa9.36□□□□□ -0.91
CPSF4-210ENST00000469897 IAH1Q2TAA2 248 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-210ENST00000469897 OR10P1Q8NGE3 313 aa9.36□□□□□ -0.91
CPSF4-210ENST00000469897 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
CPSF4-210ENST00000469897 RBM38Q9H0Z9 239 aaKnown RBP9.36□□□□□ -0.91
CPSF4-210ENST00000469897 ARV1Q9H2C2 271 aa9.36□□□□□ -0.91
CPSF4-210ENST00000469897 F5H768 121 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms