RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 OR1S1Q8NH92 325 aa12.07□□□□□ -0.48
HMGN1-209ENST00000463631 SCGB3A2Q96PL1 93 aa12.07□□□□□ -0.48
HMGN1-209ENST00000463631 SLC25A22Q9H936 323 aa12.07□□□□□ -0.48
HMGN1-209ENST00000463631 TRAV8-2A0A0B4J237 113 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 DUXBA0A1W2PPF3 345 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 PRSS46E5RG02 174 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 BOLA2-SMG1P6H3BVE0 249 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 ANXA3P12429 323 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 S100A7P31151 101 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 RNF141Q8WVD5 230 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 RABL2AQ9UBK7 228 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-209ENST00000463631 SCP2D1Q9UJQ7 156 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 RABL2BQ9UNT1 228 aa12.06□□□□□ -0.48
HMGN1-209ENST00000463631 ANKRD20A5PA0PJZ0 165 aa12.05□□□□□ -0.48
HMGN1-209ENST00000463631 RGS5O15539 181 aa12.05□□□□□ -0.48
HMGN1-209ENST00000463631 AZU1P20160 251 aa12.05□□□□□ -0.48
HMGN1-209ENST00000463631 TTC32Q5I0X7 151 aa12.05□□□□□ -0.48
HMGN1-209ENST00000463631 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
HMGN1-209ENST00000463631 BPIFCQ8NFQ6 507 aa12.05□□□□□ -0.48
HMGN1-209ENST00000463631 TAS2R60P59551 318 aa12.04□□□□□ -0.48
HMGN1-209ENST00000463631 SSX7Q7RTT5 188 aa12.04□□□□□ -0.48
HMGN1-209ENST00000463631 RNF182Q8N6D2 247 aa12.04□□□□□ -0.48
HMGN1-209ENST00000463631 C16orf74Q96GX8 76 aa12.04□□□□□ -0.48
HMGN1-209ENST00000463631 KRTAP1-5Q9BYS1 174 aa12.04□□□□□ -0.48
HMGN1-209ENST00000463631 SCRT2Q9NQ03 307 aa12.04□□□□□ -0.48
HMGN1-209ENST00000463631 HERC1Q15751 4861 aa12.04□□□□□ -0.48
HMGN1-209ENST00000463631 CTDSP2O14595 271 aa12.03□□□□□ -0.48
HMGN1-209ENST00000463631 IAPPP10997 89 aa12.03□□□□□ -0.48
HMGN1-209ENST00000463631 SLC25A6P12236 298 aa12.03□□□□□ -0.48
HMGN1-209ENST00000463631 BTF3P20290 206 aaKnown RBP12.03□□□□□ -0.48
HMGN1-209ENST00000463631 FCN2Q15485 313 aa12.03□□□□□ -0.48
HMGN1-209ENST00000463631 ZNF493Q6ZR52 646 aa12.03□□□□□ -0.48
HMGN1-209ENST00000463631 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
HMGN1-209ENST00000463631 CIB3Q96Q77 187 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-209ENST00000463631 TMEM147Q9BVK8 224 aa12.03□□□□□ -0.48
HMGN1-209ENST00000463631 Q9H3A6 140 aa12.03□□□□□ -0.48
HMGN1-209ENST00000463631 TRAV12-2A0A075B6T6 113 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 H3BRN7 92 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 ORM2P19652 201 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 IL18Q14116 193 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 CLINT1Q14677 625 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 IGFL4Q6B9Z1 124 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 ZNF738Q8NE65 137 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 UPK3BQ9BT76 320 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 SLC25A39Q9BZJ4 359 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-209ENST00000463631 Q9H8V8 135 aa12.02□□□□□ -0.49
HMGN1-209ENST00000463631 TIMM8BQ9Y5J9 83 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-209ENST00000463631 A0A1W2PPQ1 181 aa12.01□□□□□ -0.49
HMGN1-209ENST00000463631 MED6O75586 246 aa12.01□□□□□ -0.49
HMGN1-209ENST00000463631 RPL7P18124 248 aaKnown RBP12.01□□□□□ -0.49
HMGN1-209ENST00000463631 GATA2P23769 480 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-209ENST00000463631 RPP30P78346 268 aaKnown RBP12.01□□□□□ -0.49
HMGN1-209ENST00000463631 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-209ENST00000463631 LRTM2Q8N967 370 aa12.01□□□□□ -0.49
HMGN1-209ENST00000463631 OR8A1Q8NGG7 326 aa12.01□□□□□ -0.49
HMGN1-209ENST00000463631 RNASE8Q8TDE3 154 aaKnown RBP12.01□□□□□ -0.49
HMGN1-209ENST00000463631 TMEM263Q8WUH6 116 aaKnown RBP12.01□□□□□ -0.49
HMGN1-209ENST00000463631 LINC01587Q99440 93 aa12.01□□□□□ -0.49
HMGN1-209ENST00000463631 SHANK2-AS3Q9BTD1 123 aa12.01□□□□□ -0.49
HMGN1-209ENST00000463631 CXCL3P19876 107 aa12□□□□□ -0.49
HMGN1-209ENST00000463631 KRTAP10-2P60368 255 aa12□□□□□ -0.49
HMGN1-209ENST00000463631 HIST1H1AQ02539 215 aaPredicted RBP12□□□□□ -0.49
HMGN1-209ENST00000463631 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
HMGN1-209ENST00000463631 LINC00612Q8N6U2 182 aa12□□□□□ -0.49
HMGN1-209ENST00000463631 OR10J6PQ8NGY7 276 aa12□□□□□ -0.49
HMGN1-209ENST00000463631 DIRAS2Q96HU8 199 aa12□□□□□ -0.49
HMGN1-209ENST00000463631 MCUBQ9NWR8 336 aa12□□□□□ -0.49
HMGN1-209ENST00000463631 PAIP2BQ9ULR5 123 aaKnown RBP12□□□□□ -0.49
HMGN1-209ENST00000463631 A0A087X0K7 114 aa11.99□□□□□ -0.49
HMGN1-209ENST00000463631 SYNGR2O43760 224 aa11.99□□□□□ -0.49
HMGN1-209ENST00000463631 SMIM18P0DKX4 95 aa11.99□□□□□ -0.49
HMGN1-209ENST00000463631 AKR1C1Q04828 323 aa11.99□□□□□ -0.49
HMGN1-209ENST00000463631 TMEM128Q5BJH2 165 aa11.99□□□□□ -0.49
HMGN1-209ENST00000463631 ACOT7LQ6ZUV0 252 aa11.99□□□□□ -0.49
HMGN1-209ENST00000463631 H7BYZ3 331 aa11.98□□□□□ -0.49
HMGN1-209ENST00000463631 M6PRP20645 277 aa11.98□□□□□ -0.49
HMGN1-209ENST00000463631 CDKN1BP46527 198 aa11.98□□□□□ -0.49
HMGN1-209ENST00000463631 RHOBP62745 196 aa11.98□□□□□ -0.49
HMGN1-209ENST00000463631 FGL1Q08830 312 aa11.98□□□□□ -0.49
HMGN1-209ENST00000463631 RXFP4Q8TDU9 374 aa11.98□□□□□ -0.49
HMGN1-209ENST00000463631 GNPNAT1Q96EK6 184 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-209ENST00000463631 C20orf144Q9BQM9 153 aa11.98□□□□□ -0.49
HMGN1-209ENST00000463631 NOP10Q9NPE3 64 aaKnown RBP11.98□□□□□ -0.49
HMGN1-209ENST00000463631 RSL24D1Q9UHA3 163 aaKnown RBP11.98□□□□□ -0.49
HMGN1-209ENST00000463631 HIGD1AQ9Y241 93 aa11.98□□□□□ -0.49
HMGN1-209ENST00000463631 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
HMGN1-209ENST00000463631 H3BNG1 76 aa11.97□□□□□ -0.49
HMGN1-209ENST00000463631 PLP1P60201 277 aa11.97□□□□□ -0.49
HMGN1-209ENST00000463631 RAP2BP61225 183 aa11.97□□□□□ -0.49
HMGN1-209ENST00000463631 SPCS2Q15005 226 aa11.97□□□□□ -0.49
HMGN1-209ENST00000463631 PSG3Q16557 428 aa11.97□□□□□ -0.49
HMGN1-209ENST00000463631 PPP1R14DQ9NXH3 145 aa11.97□□□□□ -0.49
HMGN1-209ENST00000463631 MRPS16Q9Y3D3 137 aaKnown RBP11.97□□□□□ -0.49
HMGN1-209ENST00000463631 ZNF701M0R085 212 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-209ENST00000463631 ADAP1O75689 374 aa11.96□□□□□ -0.49
HMGN1-209ENST00000463631 HTN1P15515 57 aa11.96□□□□□ -0.49
HMGN1-209ENST00000463631 CYP2G1PQ6ZSU1 146 aa11.96□□□□□ -0.49
HMGN1-209ENST00000463631 CCDC59Q9P031 241 aaKnown RBP11.96□□□□□ -0.49
HMGN1-209ENST00000463631 WRBO00258 174 aa11.95□□□□□ -0.5
HMGN1-209ENST00000463631 HYPMO75409 117 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms