RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 SH2D7A6NKC9 451 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-213ENST00000462730 IGKV1-17P01599 117 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 PSG1P11464 419 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 PLP1P60201 277 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 TRBV20OR9-2A0A075B6H5 130 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 J3QLI3 93 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 ATP6V0E1O15342 81 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 ECSCRQ19T08 205 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 UNQ5815/PRO19632Q6UWF5 114 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 C5orf56Q8N8D9 126 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 SGMS2Q8NHU3 365 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 C11orf52Q96A22 123 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 MEGF9Q9H1U4 602 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 HIGD1AQ9Y241 93 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 MOB4Q9Y3A3 225 aa11.37□□□□□ -0.59
HDAC6-213ENST00000462730 OR2J3O76001 311 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 NDUFB8O95169 186 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 PAFAH1B2P68402 229 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 CYB5R2Q6BCY4 276 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 FAM110DQ8TAY7 271 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-213ENST00000462730 PIFOQ8TCI5 191 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 ABCA1O95477 2261 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 MDFIC2A0A1B0GVS7 189 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 A0A1W2PRE2 83 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 GGTLC3B5MD39 225 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 MFAP4P55083 255 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 WFDC11Q8NEX6 87 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 C20orf144Q9BQM9 153 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 TMUB1Q9BVT8 246 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 THYN1Q9P016 225 aa11.36□□□□□ -0.59
HDAC6-213ENST00000462730 ZANQ9Y493 2812 aa11.35□□□□□ -0.59
HDAC6-213ENST00000462730 GNG7O60262 68 aa11.35□□□□□ -0.59
HDAC6-213ENST00000462730 Q56UQ5 140 aa11.35□□□□□ -0.59
HDAC6-213ENST00000462730 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
HDAC6-213ENST00000462730 FXYD5Q96DB9 178 aa11.35□□□□□ -0.59
HDAC6-213ENST00000462730 NAGKQ9UJ70 344 aa11.35□□□□□ -0.59
HDAC6-213ENST00000462730 GOLT1BQ9Y3E0 138 aa11.35□□□□□ -0.59
HDAC6-213ENST00000462730 CHTOPQ9Y3Y2 248 aaKnown RBP11.35□□□□□ -0.59
HDAC6-213ENST00000462730 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 EREGO14944 169 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 TOMM40O96008 361 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 IGHV3-23P01764 117 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 RPLP1P05386 114 aaKnown RBP11.34□□□□□ -0.59
HDAC6-213ENST00000462730 TEX38Q6PEX7 206 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 STXBP6Q8NFX7 210 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 ZNF48Q96MX3 618 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-213ENST00000462730 SNHG12Q9BXW3 62 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 C21orf62Q9NYP8 219 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 FBXL7Q9UJT9 491 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 CREBBPQ92793 2442 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 TRAV30A0A087WSZ9 112 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 LINC01548A6NM66 108 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 DLEU1O43261 78 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 SCGB1D1O95968 90 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 ESDP10768 282 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 CRYBB3P26998 211 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-213ENST00000462730 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
HDAC6-213ENST00000462730 LY6EQ16553 131 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 LEMD1Q68G75 181 aa11.34□□□□□ -0.59
HDAC6-213ENST00000462730 UNC79Q9P2D8 2635 aa11.33□□□□□ -0.6
HDAC6-213ENST00000462730 F8W735 103 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-213ENST00000462730 H3BUX3 64 aa11.33□□□□□ -0.6
HDAC6-213ENST00000462730 NUPR1O60356 82 aa11.33□□□□□ -0.6
HDAC6-213ENST00000462730 ADMP35318 185 aa11.33□□□□□ -0.6
HDAC6-213ENST00000462730 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-213ENST00000462730 PRRC2AP48634 2157 aaKnown RBP11.33□□□□□ -0.6
HDAC6-213ENST00000462730 PDZD2O15018 2839 aa11.33□□□□□ -0.6
HDAC6-213ENST00000462730 G3V318 75 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 GP9P14770 177 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 HNF1AP20823 631 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 OR10G8Q8NGN5 311 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 OCC1Q8TAD7 63 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 MRPL27Q9P0M9 148 aaKnown RBP11.32□□□□□ -0.6
HDAC6-213ENST00000462730 AMY1AP04745 511 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 TPPP2P59282 170 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 RPL19P84098 196 aaKnown RBP11.32□□□□□ -0.6
HDAC6-213ENST00000462730 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 CIARTQ8N365 385 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-213ENST00000462730 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 MS4A10Q96PG2 267 aa11.32□□□□□ -0.6
HDAC6-213ENST00000462730 A6NDX4 124 aa11.31□□□□□ -0.6
HDAC6-213ENST00000462730 OR2T8A6NH00 312 aa11.31□□□□□ -0.6
HDAC6-213ENST00000462730 IL4P05112 153 aa11.31□□□□□ -0.6
HDAC6-213ENST00000462730 ZNF491Q8N8L2 437 aa11.31□□□□□ -0.6
HDAC6-213ENST00000462730 CMTM2Q8TAZ6 248 aa11.31□□□□□ -0.6
HDAC6-213ENST00000462730 RNF125Q96EQ8 232 aa11.31□□□□□ -0.6
HDAC6-213ENST00000462730 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
HDAC6-213ENST00000462730 WI2-2373I1.2A0A1W2PRP0 233 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 HELTA6NFD8 242 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 C9JCJ5 164 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 RHOGP84095 191 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 TMEM183BQ1AE95 376 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 KLK9Q2XQG4 91 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 COX19Q49B96 90 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-213ENST00000462730 VN1R17PQ8TDU5 208 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 MIEN1Q9BRT3 115 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 KLK9Q9UKQ9 250 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms