RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 DTX2Q86UW9 622 aa9.25□□□□□ -0.93
TRAPPC3-205ENST00000462715 RAI1Q7Z5J4 1906 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC3-205ENST00000462715 SPG11Q96JI7 2443 aa9.25□□□□□ -0.93
TRAPPC3-205ENST00000462715 VWC2LB2RUY7 222 aa9.25□□□□□ -0.93
TRAPPC3-205ENST00000462715 IL1F10Q8WWZ1 152 aa9.25□□□□□ -0.93
TRAPPC3-205ENST00000462715 HSD17B10Q99714 261 aaKnown RBP9.25□□□□□ -0.93
TRAPPC3-205ENST00000462715 MRPL32Q9BYC8 188 aaKnown RBP9.25□□□□□ -0.93
TRAPPC3-205ENST00000462715 POLQO75417 2590 aa9.25□□□□□ -0.93
TRAPPC3-205ENST00000462715 NAV2Q8IVL1 2488 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 A0A1W2PRD5 423 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 A0A1W2PRF3 423 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 A0A1W2PRM7 423 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 RBMXL2O75526 392 aaKnown RBP9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 ATP5IP56385 69 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 GAGE5Q13069 117 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 GAGE6Q13070 117 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 KLRD1Q13241 179 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 PSG5Q15238 335 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 MBNL2Q5VZF2 373 aaKnown RBP9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 LINC00173Q6ZV60 143 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 NRGNQ92686 78 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 SPAG8Q99932 426 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 ZNF747Q9BV97 191 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 PLEKHA3Q9HB20 300 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 RTTNQ86VV8 2226 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 AKAP6Q13023 2319 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 SLC25A17O43808 307 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 Q6P435 159 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 Q8IYB0 196 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 KLF14Q8TD94 323 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 GALMQ96C23 342 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 FZR1Q9UM11 496 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 NOTCH2Q04721 2471 aa9.24□□□□□ -0.93
TRAPPC3-205ENST00000462715 HIGD1CA8MV81 97 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 A8MWL6 223 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 FOXH1O75593 365 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 ERVK11-1P61568 191 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 C8orf86Q6ZUL3 223 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 GATD1Q8NB37 220 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 ZNF492Q9P255 531 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 CACNA1DQ01668 2161 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 IGLV3-9A0A075B6K5 115 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 E9PLD3 99 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 SYNGR1O43759 233 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 IGHV3-13P01766 116 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 DUTP33316 252 aaKnown RBP9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 SPATA31B1PQ5VZV4 182 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 C11orf71Q6IPW1 123 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 OR9G1Q8NH87 305 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 FAM168AQ92567 244 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 ZC2HC1AQ96GY0 325 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 C1orf159Q96HA4 380 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 RAX2Q96IS3 184 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 DYNLRB1Q9NP97 96 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 BEX4Q9NWD9 120 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
TRAPPC3-205ENST00000462715 DSCAMO60469 2012 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 GGTLC3B5MD39 225 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 RPL30P62888 115 aaKnown RBP9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 ZNF816Q0VGE8 651 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 MSMPQ1L6U9 139 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 IGFBPL1Q8WX77 278 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 TMEM190Q8WZ59 177 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 FGF23Q9GZV9 251 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 ZNF355PQ9NSJ1 428 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 MPC1Q9Y5U8 109 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 SH2D7A6NKC9 451 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 TIMM8AO60220 97 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 MPV17P39210 176 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 NEU4Q8WWR8 484 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 C7orf69Q9H7B7 122 aa9.22□□□□□ -0.93
TRAPPC3-205ENST00000462715 C17orf98A8MV24 154 aa9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 OVOL3O00110 214 aa9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 HSPB6O14558 160 aa9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 CA1P00915 261 aaPredicted RBP9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 IGHG4P01861 327 aa9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 BRWD1-AS2P59051 145 aa9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 MIR17HGQ75NE6 70 aa9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 LINC00312Q9Y6C7 94 aa9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 CSMD2Q7Z408 3487 aa9.21□□□□□ -0.93
TRAPPC3-205ENST00000462715 KBTBD11-OT1A0A1B0GTJ5 212 aa9.21□□□□□ -0.94
TRAPPC3-205ENST00000462715 A0A1B0GW15 77 aa9.21□□□□□ -0.94
TRAPPC3-205ENST00000462715 C8orf88P0DMB2 117 aa9.21□□□□□ -0.94
TRAPPC3-205ENST00000462715 GNG3P63215 75 aa9.21□□□□□ -0.94
TRAPPC3-205ENST00000462715 TAL2Q16559 108 aa9.21□□□□□ -0.94
TRAPPC3-205ENST00000462715 DEFB113Q30KQ7 82 aa9.21□□□□□ -0.94
TRAPPC3-205ENST00000462715 PHLDA1Q8WV24 401 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC3-205ENST00000462715 PRSS22Q9GZN4 317 aa9.21□□□□□ -0.94
TRAPPC3-205ENST00000462715 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 HAX1O00165 279 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 CAMPP49913 170 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 NABP2Q9BQ15 211 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 TM2D2Q9BX73 214 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 RAB1BQ9H0U4 201 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 RPP21Q9H633 154 aaKnown RBP9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 AP5S1Q9NUS5 200 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms