RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 VAMP2P63027 116 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 TEPPQ6URK8 271 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 ZNF546Q86UE3 836 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 OR4B1Q8NGF8 309 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 SHANK2-AS3Q9BTD1 123 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 RSG1Q9BU20 258 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 SLC25A39Q9BZJ4 359 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-204ENST00000462258 NPVFQ9HCQ7 196 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 RPRMQ9NS64 109 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 LSM5Q9Y4Y9 91 aaKnown RBP7.36□□□□□ -1.23
SF3A3-204ENST00000462258 ELOA3CA0A087WX78 387 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-204ENST00000462258 A0A0J9YX75 114 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 K7EPK0 472 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 HYPMO75409 117 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 OR5G3P0C626 314 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 RPL7P18124 248 aaKnown RBP7.35□□□□□ -1.23
SF3A3-204ENST00000462258 FXYD7P58549 80 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 PLP1P60201 277 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 S100A10P60903 97 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 ARL16Q0P5N6 197 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 ASAH1Q13510 395 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 SPATA31B1PQ5VZV4 182 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 MZT2BQ6NZ67 158 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 EBLN2Q6P2I7 272 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 C12orf45Q8N5I9 185 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-204ENST00000462258 ZNF709Q8N972 641 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 ENKURQ8TC29 256 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 C2CD4CQ8TF44 421 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 C20orf173Q96LM9 149 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 C17orf77Q96MU5 243 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 UHRF2Q96PU4 802 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 GGACTQ9BVM4 153 aa7.35□□□□□ -1.23
SF3A3-204ENST00000462258 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 DNAH10Q8IVF4 4471 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 C11orf94C9JXX5 98 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 HLA-DMBP28068 263 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 BCAP31P51572 246 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 CAV2P51636 162 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 FGL1Q08830 312 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 FAM78BQ5VT40 261 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 ZNF705AQ6ZN79 300 aaPredicted RBP7.34□□□□□ -1.23
SF3A3-204ENST00000462258 Q6ZTC4 211 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 S100A7AQ86SG5 101 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 C2orf50Q96LR7 162 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 CLUHP3Q96NS8 147 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 ARL6Q9H0F7 186 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 SLC35B3Q9H1N7 401 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 ARV1Q9H2C2 271 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 PTTG2Q9NZH5 202 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 CELA1Q9UNI1 258 aa7.34□□□□□ -1.23
SF3A3-204ENST00000462258 IGHV3OR16-12A0A075B7B8 117 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 TRAV8-2A0A0B4J237 113 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 ZNF705FA8MVS1 300 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-204ENST00000462258 GOSR2O14653 212 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 AGPAT2O15120 278 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 DEDDO75618 318 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 UPK1BO75841 260 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 ZNF705DP0CH99 300 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-204ENST00000462258 ZNF705BP0CI00 300 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-204ENST00000462258 PVALBP20472 110 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-204ENST00000462258 PSG9Q00887 426 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 PXDC1Q5TGL8 231 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 NEU1Q99519 415 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 MGST2Q99735 147 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 C11orf1Q9H5F2 150 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 PLA2G2EQ9NZK7 142 aa7.33□□□□□ -1.24
SF3A3-204ENST00000462258 FRAS1Q86XX4 4008 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 A0A087X0K7 114 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 TRAV10A0A0B4J240 114 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 FAM24AA6NFZ4 105 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 A6NHS1 94 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 A8MTW9 85 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 COX7A2P2O60397 106 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 CST7O76096 145 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 CNN1P51911 297 aaKnown RBP7.32□□□□□ -1.24
SF3A3-204ENST00000462258 RAB32Q13637 225 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 IGFL4Q6B9Z1 124 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 LGALS9CQ6DKI2 356 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 PATE2Q6UY27 113 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 STX12Q86Y82 276 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 ZNF738Q8NE65 137 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 LYRM2Q9NU23 88 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-204ENST00000462258 UQCC1Q9NVA1 299 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 RNF24Q9Y225 148 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 GOLT1BQ9Y3E0 138 aa7.32□□□□□ -1.24
SF3A3-204ENST00000462258 UBE2L5PA0A1B0GUS4 154 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 IGSF23A1L1A6 192 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 TMEM189A5PLL7 270 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 IGLL5B9A064 214 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 DUSP14O95147 198 aaKnown RBP7.31□□□□□ -1.24
SF3A3-204ENST00000462258 CXCL2P19875 107 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 CAMLGP49069 296 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 SULT1A1P50225 295 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 TCTAP57738 103 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 AMTNQ6UX39 209 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 ZNF767PQ75MW2 155 aa7.31□□□□□ -1.24
SF3A3-204ENST00000462258 GPN1Q9HCN4 374 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-204ENST00000462258 RFNGQ9Y644 331 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms