RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 ALMS1Q8TCU4 4167 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 OR11H12B2RN74 326 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 FAM90A2PQ658T7 463 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 CHAC2Q8WUX2 184 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 AQP10Q96PS8 301 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 TM2D3Q9BRN9 247 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 GGTLC1Q9BX51 225 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 MS4A6AQ9H2W1 248 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 DNAJC4Q9NNZ3 241 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 SLC39A9Q9NUM3 307 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 PXMP4Q9Y6I8 212 aa9.37□□□□□ -0.91
HDAC4-207ENST00000461113 BORCS7-ASMTA0A0B4J1R7 106 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 ZNF98A6NK75 572 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 RPL7P18124 248 aaKnown RBP9.36□□□□□ -0.91
HDAC4-207ENST00000461113 ID1P41134 155 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 SNRPD3P62318 126 aaKnown RBP9.36□□□□□ -0.91
HDAC4-207ENST00000461113 OPCMLQ14982 345 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 C10orf113Q5VZT2 155 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 MIC13Q5XKP0 118 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 Q6ZNX1 250 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 TMEM182Q6ZP80 229 aaPredicted RBP9.36□□□□□ -0.91
HDAC4-207ENST00000461113 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 NPCDR1Q9BY65 106 aa9.36□□□□□ -0.91
HDAC4-207ENST00000461113 SLC25A39Q9BZJ4 359 aaPredicted RBP9.36□□□□□ -0.91
HDAC4-207ENST00000461113 WDR61Q9GZS3 305 aaKnown RBP9.36□□□□□ -0.91
HDAC4-207ENST00000461113 KIAA1109Q2LD37 5005 aa9.35□□□□□ -0.91
HDAC4-207ENST00000461113 CD7P09564 240 aa9.35□□□□□ -0.91
HDAC4-207ENST00000461113 ATF4P18848 351 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-207ENST00000461113 MEOX2P50222 304 aa9.35□□□□□ -0.91
HDAC4-207ENST00000461113 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
HDAC4-207ENST00000461113 GATAD1Q8WUU5 269 aa9.35□□□□□ -0.91
HDAC4-207ENST00000461113 FAM110AQ9BQ89 295 aa9.35□□□□□ -0.91
HDAC4-207ENST00000461113 SHANK2-AS3Q9BTD1 123 aa9.35□□□□□ -0.91
HDAC4-207ENST00000461113 NRN1Q9NPD7 142 aa9.35□□□□□ -0.91
HDAC4-207ENST00000461113 H3BRN7 92 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 ARPC5O15511 151 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 PRR20EP86478 221 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 PRR20CP86479 221 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 PRR20DP86480 221 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 PRR20BP86481 221 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 PRR20AP86496 221 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 Q5BKY6 102 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 Q8N1Y9 231 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 LRRC20Q8TCA0 184 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
HDAC4-207ENST00000461113 MFFQ9GZY8 342 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 TNFSF18Q9UNG2 199 aa9.34□□□□□ -0.91
HDAC4-207ENST00000461113 hCG_2014768A0A024R1R8 64 aa9.33□□□□□ -0.92
HDAC4-207ENST00000461113 TAAR5O14804 337 aa9.33□□□□□ -0.92
HDAC4-207ENST00000461113 BPIFA4PQ86YQ2 179 aa9.33□□□□□ -0.92
HDAC4-207ENST00000461113 DEFB125Q8N687 156 aa9.33□□□□□ -0.92
HDAC4-207ENST00000461113 RSG1Q9BU20 258 aa9.33□□□□□ -0.92
HDAC4-207ENST00000461113 SEPSECSQ9HD40 501 aaKnown RBP9.33□□□□□ -0.92
HDAC4-207ENST00000461113 UBQLN2Q9UHD9 624 aa9.33□□□□□ -0.92
HDAC4-207ENST00000461113 A8MZ25 164 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 K7EQG2 157 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 DEFB131AP59861 70 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 ACOT6Q3I5F7 207 aaPredicted RBP9.32□□□□□ -0.92
HDAC4-207ENST00000461113 FFAR4Q5NUL3 377 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 AKAP14Q86UN6 197 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 C16orf92Q96LL3 132 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 SLC25A32Q9H2D1 315 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 HECTD4Q9Y4D8 3996 aa9.32□□□□□ -0.92
HDAC4-207ENST00000461113 LOC102724200A0A096LPH7 203 aaPredicted RBP9.31□□□□□ -0.92
HDAC4-207ENST00000461113 A0A0D9SG52 128 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 HMSDA8MTL9 139 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 SMLR1H3BR10 107 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 ZNF688P0C7X2 276 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 FAM78BQ5VT40 261 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 LEMD1Q68G75 181 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 PATE2Q6UY27 113 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 TMEM37Q8WXS4 190 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 GNPNAT1Q96EK6 184 aaPredicted RBP9.31□□□□□ -0.92
HDAC4-207ENST00000461113 LINC00052Q96N35 136 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 WFDC1Q9HC57 220 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 TIMM9Q9Y5J7 89 aa9.31□□□□□ -0.92
HDAC4-207ENST00000461113 A0A1W2PPV4 95 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 KANTRA0A1W2PQU2 76 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 ISLRO14498 428 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 MBP02144 154 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 PSMB3P49720 205 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 APOC4P55056 127 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 TAS2R45P59539 299 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 RHOBP62745 196 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 EIF5AP63241 154 aaKnown RBP9.3□□□□□ -0.92
HDAC4-207ENST00000461113 PSMG4Q5JS54 123 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 STHQ8IWL8 128 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 TCTE3Q8IZS6 198 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 DCANP1Q8TF63 244 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 LINC00476Q8WZB0 136 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 MRPL32Q9BYC8 188 aaKnown RBP9.3□□□□□ -0.92
HDAC4-207ENST00000461113 MAP6D1Q9H9H5 199 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 C19orf73Q9NVV2 129 aa9.3□□□□□ -0.92
HDAC4-207ENST00000461113 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms