RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 CCDC153Q494R4 210 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 Q5XG85 94 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 PATE2Q6UY27 113 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 Q6ZQT0 140 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 ZNF826PQ6ZT77 177 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 PDZD9Q8IXQ8 264 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 OR2T10Q8NGZ9 312 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 PPTC7Q8NI37 304 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 PRADC1Q9BSG0 188 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 OR2H1Q9GZK4 316 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 YIPF3Q9GZM5 350 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 SPANXCQ9NY87 97 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 TRAPPC2LQ9UL33 140 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 BAIAP2Q9UQB8 552 aa1.44□□□□□ -2.18
VBP1-202ENST00000460509 TCOF1Q13428 1488 aaKnown RBP1.43□□□□□ -2.18
VBP1-202ENST00000460509 CPAMD8Q8IZJ3 1885 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 NCOA3Q9Y6Q9 1424 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 IGKV1D-42A0A075B6H8 117 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 BORCS7-ASMTA0A0B4J1R7 106 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 TRBV7-6A0A0J9YX20 115 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 K7ERJ3 54 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 M0QZK8 103 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 SDCBPO00560 298 aaPredicted RBP1.43□□□□□ -2.18
VBP1-202ENST00000460509 METTL15P1P0C7V9 234 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 TRGC1P0CF51 173 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 DPPA3Q6W0C5 159 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 AAED1Q7RTV5 226 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 SLC30A7Q8NEW0 376 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 OR4E2Q8NGC2 313 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 ADAT1Q9BUB4 502 aaKnown RBP1.43□□□□□ -2.18
VBP1-202ENST00000460509 NPCDR1Q9BY65 106 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 POPDC3Q9HBV1 291 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 SBF1O95248 1867 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 ANKRD31Q8N7Z5 1873 aa1.43□□□□□ -2.18
VBP1-202ENST00000460509 RP1L1Q8IWN7 2480 aaPredicted RBP1.43□□□□□ -2.18
VBP1-202ENST00000460509 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
VBP1-202ENST00000460509 IBA57-AS1B1ANH7 110 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 HIST1H2BKO60814 126 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 CST7O76096 145 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 HIST1H2BJP06899 126 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 SCTP09683 121 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 HLA-EP13747 358 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 RPL35P42766 123 aaKnown RBP1.42□□□□□ -2.18
VBP1-202ENST00000460509 ZNF345Q14585 488 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 SMIM21Q3B7S5 101 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 MORN2Q502X0 79 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 BRMS1LQ5PSV4 323 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
VBP1-202ENST00000460509 CROCCP2Q86T23 111 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 IFT20Q8IY31 132 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 C9orf163Q8N9P6 203 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 TMEM229BQ8NBD8 167 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 C10orf105Q8TEF2 133 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 LINC00467Q9BRT7 94 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 FAM107BQ9H098 131 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 TMEM138Q9NPI0 162 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 NHP2Q9NX24 153 aaKnown RBP1.42□□□□□ -2.18
VBP1-202ENST00000460509 NAT8BQ9UHF3 227 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 LHFPL6Q9Y693 200 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 MED23Q9ULK4 1368 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 XIRP1Q702N8 1843 aaKnown RBP1.42□□□□□ -2.18
VBP1-202ENST00000460509 KMT2BQ9UMN6 2715 aaPredicted RBP1.42□□□□□ -2.18
VBP1-202ENST00000460509 NUMA1Q14980 2115 aa1.42□□□□□ -2.18
VBP1-202ENST00000460509 N4BP2Q86UW6 1770 aaPredicted RBP1.42□□□□□ -2.18
VBP1-202ENST00000460509 PTPRBP23467 1997 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 NUP98P52948 1817 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 MYH7BA7E2Y1 1941 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 GREB1Q4ZG55 1949 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 IGHV1-58A0A0C4DH39 117 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 LOC107984640A0A0U1RRK4 108 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 TMEM189A5PLL7 270 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 TIMM17BO60830 172 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 PMP2P02689 132 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 SDC2P34741 201 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 SRP9P49458 86 aaKnown RBP1.41□□□□□ -2.18
VBP1-202ENST00000460509 TMBIM6P55061 237 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 HBBP68871 147 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 ESRGQ1W209 222 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 VMA21Q3ZAQ7 101 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 RPS19BP1Q86WX3 136 aaKnown RBP1.41□□□□□ -2.18
VBP1-202ENST00000460509 Q8IYB0 196 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 OR8I2Q8N0Y5 310 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 OR8B3Q8NGG8 313 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 ZNF418Q8TF45 676 aaPredicted RBP1.41□□□□□ -2.18
VBP1-202ENST00000460509 LZICQ8WZA0 190 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 TAF9BQ9HBM6 251 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 BCL2L10Q9HD36 194 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 TAS2R4Q9NYW5 299 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 HS3ST2Q9Y278 367 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 SOX21Q9Y651 276 aaPredicted RBP1.41□□□□□ -2.18
VBP1-202ENST00000460509 RTL9Q8NET4 1388 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 A2MP01023 1474 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 COL4A5P29400 1685 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 OBSL1O75147 1896 aa1.41□□□□□ -2.18
VBP1-202ENST00000460509 LAMB2P55268 1798 aa1.4□□□□□ -2.19
VBP1-202ENST00000460509 IGKV2-40A0A087WW87 121 aaPredicted RBP1.4□□□□□ -2.19
VBP1-202ENST00000460509 A0A1B0GW64 132 aa1.4□□□□□ -2.19
VBP1-202ENST00000460509 A8MWV9 139 aa1.4□□□□□ -2.19
VBP1-202ENST00000460509 F8W036 122 aa1.4□□□□□ -2.19
VBP1-202ENST00000460509 IGKV2D-40P01614 121 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms