RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 OR10J3Q5JRS4 329 aa14.35□□□□□ -0.11
HPS3-202ENST00000460120 LCN12Q6JVE5 192 aa14.35□□□□□ -0.11
HPS3-202ENST00000460120 FAM231DQ6ZW35 169 aa14.35□□□□□ -0.11
HPS3-202ENST00000460120 RPP21Q9H633 154 aaKnown RBP14.35□□□□□ -0.11
HPS3-202ENST00000460120 FCGR2BP31994 310 aaPredicted RBP14.35□□□□□ -0.11
HPS3-202ENST00000460120 DYNAPQ8N1N2 210 aa14.35□□□□□ -0.11
HPS3-202ENST00000460120 GTSF1Q8WW33 167 aa14.35□□□□□ -0.11
HPS3-202ENST00000460120 CACNA1BQ00975 2339 aa14.35□□□□□ -0.11
HPS3-202ENST00000460120 TPPP3Q9BW30 176 aa14.35□□□□□ -0.11
HPS3-202ENST00000460120 SH2D7A6NKC9 451 aaPredicted RBP14.34□□□□□ -0.11
HPS3-202ENST00000460120 PVRIGQ6DKI7 326 aa14.34□□□□□ -0.11
HPS3-202ENST00000460120 TIMM8BQ9Y5J9 83 aaPredicted RBP14.34□□□□□ -0.11
HPS3-202ENST00000460120 TEX43Q6ZNM6 134 aa14.34□□□□□ -0.11
HPS3-202ENST00000460120 MSRB2Q9Y3D2 182 aa14.34□□□□□ -0.11
HPS3-202ENST00000460120 M0R3E3 92 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 HSBP1O75506 76 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 TOMM40O96008 361 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 C3orf79P0CE67 100 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 ZNF25P17030 456 aaPredicted RBP14.33□□□□□ -0.12
HPS3-202ENST00000460120 COL8A1P27658 744 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 MAJINQ3KP22 176 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 NIT1Q86X76 327 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 FMC1Q96HJ9 113 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 LTAP01374 205 aa14.33□□□□□ -0.12
HPS3-202ENST00000460120 ZFHX3Q15911 3703 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 GNG7O60262 68 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 KLRB1Q12918 225 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 LY6DQ14210 128 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 COX19Q49B96 90 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 Q86TA4 180 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 CFHR4Q92496 578 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 MLST8Q9BVC4 326 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 KLF12Q9Y4X4 402 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 NDPQ00604 133 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 Q56UQ5 140 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 Q8N976 141 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 LY6G5BQ8NDX9 201 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 BORCS7Q96B45 105 aa14.32□□□□□ -0.12
HPS3-202ENST00000460120 COL25A1Q9BXS0 654 aaPredicted RBP14.32□□□□□ -0.12
HPS3-202ENST00000460120 M0R2Z0 102 aa14.31□□□□□ -0.12
HPS3-202ENST00000460120 VMO1Q7Z5L0 202 aa14.31□□□□□ -0.12
HPS3-202ENST00000460120 A0A1W2PPR1 153 aa14.31□□□□□ -0.12
HPS3-202ENST00000460120 M0R143 59 aa14.31□□□□□ -0.12
HPS3-202ENST00000460120 RNF125Q96EQ8 232 aa14.31□□□□□ -0.12
HPS3-202ENST00000460120 ALKBH7Q9BT30 221 aaPredicted RBP14.31□□□□□ -0.12
HPS3-202ENST00000460120 SPTAN1Q13813 2472 aaKnown RBP14.31□□□□□ -0.12
HPS3-202ENST00000460120 ZFP36P26651 326 aaKnown RBP14.3□□□□□ -0.12
HPS3-202ENST00000460120 HBBP68871 147 aa14.3□□□□□ -0.12
HPS3-202ENST00000460120 OTORQ9NRC9 128 aa14.3□□□□□ -0.12
HPS3-202ENST00000460120 CLEC5AQ9NY25 188 aa14.3□□□□□ -0.12
HPS3-202ENST00000460120 PLP1P60201 277 aa14.3□□□□□ -0.12
HPS3-202ENST00000460120 FBXL19-AS1Q494R0 122 aa14.3□□□□□ -0.12
HPS3-202ENST00000460120 SPATA45Q537H7 98 aa14.3□□□□□ -0.12
HPS3-202ENST00000460120 OR4F17Q8NGA8 305 aa14.3□□□□□ -0.12
HPS3-202ENST00000460120 CHRDL1Q9BU40 450 aa14.3□□□□□ -0.12
HPS3-202ENST00000460120 MRPL27Q9P0M9 148 aaKnown RBP14.3□□□□□ -0.12
HPS3-202ENST00000460120 A8MWL6 223 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 OR2J3O76001 311 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 CEACAM3P40198 252 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 ZNF138P52744 262 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 COTL1Q14019 142 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 IGFL4Q6B9Z1 124 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 BPIFA4PQ86YQ2 179 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 ZNF491Q8N8L2 437 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 LPAR2Q9HBW0 351 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 TMSB15BA0A087X1C1 80 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 OR2T8A6NH00 312 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 HLA-DRB1P01911 266 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 NPSP0C0P6 89 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 RAB4AP20338 218 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 C5orf64Q2M2E5 130 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 UBTD1Q9HAC8 227 aa14.29□□□□□ -0.12
HPS3-202ENST00000460120 IGLV2-11P01706 119 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 OR11H6Q8NGC7 330 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 WIPF2Q8TF74 440 aaPredicted RBP14.28□□□□□ -0.12
HPS3-202ENST00000460120 ZC2HC1AQ96GY0 325 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 SHANK2-AS3Q9BTD1 123 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 VPS13CQ709C8 3753 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 TRBV19A0A075B6N1 114 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 MUC21A0A0G2JKD1 596 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 MUC21A0A140T8X8 626 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 C19orf71A6NCJ1 209 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 MUC21Q5SSG8 566 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 CELSR1Q9NYQ6 3014 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 CSN3P07498 182 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 ARPC1AQ92747 370 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 MIEN1Q9BRT3 115 aa14.28□□□□□ -0.12
HPS3-202ENST00000460120 MAP1AP78559 2803 aaPredicted RBP14.28□□□□□ -0.12
HPS3-202ENST00000460120 A0A1B0GXF2 115 aa14.27□□□□□ -0.12
HPS3-202ENST00000460120 H0Y8G0 127 aa14.27□□□□□ -0.12
HPS3-202ENST00000460120 CHEK1O14757 476 aa14.27□□□□□ -0.12
HPS3-202ENST00000460120 PRSS22Q9GZN4 317 aa14.27□□□□□ -0.12
HPS3-202ENST00000460120 GOLT1BQ9Y3E0 138 aa14.27□□□□□ -0.12
HPS3-202ENST00000460120 PRTN3P24158 256 aa14.27□□□□□ -0.13
HPS3-202ENST00000460120 H3BRN7 92 aa14.26□□□□□ -0.13
HPS3-202ENST00000460120 NDUFB8O95169 186 aa14.26□□□□□ -0.13
HPS3-202ENST00000460120 FAM120AOSQ5T036 256 aa14.26□□□□□ -0.13
HPS3-202ENST00000460120 C11orf71Q6IPW1 123 aa14.26□□□□□ -0.13
HPS3-202ENST00000460120 EBLN2Q6P2I7 272 aa14.26□□□□□ -0.13
HPS3-202ENST00000460120 C8orf49Q96NF6 230 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms