RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 ZNF546Q86UE3 836 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 OR11H7Q8NGC8 314 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 OR5C1Q8NGR4 320 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 DCANP1Q8TF63 244 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 RAB24Q969Q5 203 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 RCHY1Q96PM5 261 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 FAM110AQ9BQ89 295 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 TM2D3Q9BRN9 247 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 GGTLC1Q9BX51 225 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 NRN1Q9NPD7 142 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 SLC45A2Q9UMX9 530 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 HIGD1AQ9Y241 93 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 WDR83OSQ9Y284 106 aa7.47□□□□□ -1.21
RFX3-210ENST00000457373 FGF7P21781 194 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 S100A7P31151 101 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 PLP1P60201 277 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 CLINT1Q14677 625 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 VWC2Q2TAL6 325 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 C1orf194Q5T5A4 169 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 MIC13Q5XKP0 118 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 PATE2Q6UY27 113 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 THAP6Q8TBB0 222 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 UHRF2Q96PU4 802 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 SPATA25Q9BR10 227 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 SCRT1Q9BWW7 348 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 SLC25A39Q9BZJ4 359 aaPredicted RBP7.46□□□□□ -1.22
RFX3-210ENST00000457373 ARV1Q9H2C2 271 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 SLC25A32Q9H2D1 315 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 RETNQ9HD89 108 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 MBD2Q9UBB5 411 aa7.46□□□□□ -1.22
RFX3-210ENST00000457373 DNAH9Q9NYC9 4486 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 KNCNA6PVL3 124 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 H3BRN7 92 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 COX7A2P2O60397 106 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 RPL12P30050 165 aaKnown RBP7.45□□□□□ -1.22
RFX3-210ENST00000457373 GALR1P47211 349 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 PSMG4Q5JS54 123 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 Q6ZRG5 221 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 SHANK2-AS3Q9BTD1 123 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 RSG1Q9BU20 258 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 SMIM3Q9BZL3 60 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 HSPB11Q9Y547 144 aa7.45□□□□□ -1.22
RFX3-210ENST00000457373 LYL1P12980 280 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 ID1P41134 155 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 RPL29P47914 159 aaKnown RBP7.44□□□□□ -1.22
RFX3-210ENST00000457373 APOC4P55056 127 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
RFX3-210ENST00000457373 FGL1Q08830 312 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 PMS2P11Q13670 270 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 OPCMLQ14982 345 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 PXDC1Q5TGL8 231 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 C10orf113Q5VZT2 155 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 LINC00305Q7Z4B0 112 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 S100A7AQ86SG5 101 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 STHQ8IWL8 128 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 LINC00052Q96N35 136 aa7.44□□□□□ -1.22
RFX3-210ENST00000457373 GIPP09681 153 aaPredicted RBP7.43□□□□□ -1.22
RFX3-210ENST00000457373 B2MP61769 119 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 Q5BKY6 102 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 ACTL10Q5JWF8 245 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 OR1L4Q8NGR5 311 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 TMEM37Q8WXS4 190 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 WWC2-AS2Q96NR7 200 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 GPR82Q96P67 336 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 WDR61Q9GZS3 305 aaKnown RBP7.43□□□□□ -1.22
RFX3-210ENST00000457373 CSTL1Q9H114 145 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 DNAJC4Q9NNZ3 241 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 SLC39A9Q9NUM3 307 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 PXMP4Q9Y6I8 212 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 AGRNO00468 2067 aa7.43□□□□□ -1.22
RFX3-210ENST00000457373 KIR2DL5BA0A0G2JN68 375 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 KIR2DL5BA0A0G2JPC4 375 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 UBE2CO00762 179 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 SOCS3O14543 225 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 MPDU1O75352 247 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 IFNA5P01569 189 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 SNRPCP09234 159 aaKnown RBP7.42□□□□□ -1.22
RFX3-210ENST00000457373 RPL7P18124 248 aaKnown RBP7.42□□□□□ -1.22
RFX3-210ENST00000457373 MEOX2P50222 304 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 DEFB1P60022 68 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 DEFB135Q30KP9 77 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 IGFL4Q6B9Z1 124 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 KIR2DL5AQ8N109 375 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 ZNF709Q8N972 641 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 KIR2DL5BQ8NHK3 375 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 LRRC20Q8TCA0 184 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 ATP5SQ99766 215 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 NPCDR1Q9BY65 106 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 SEPSECSQ9HD40 501 aaKnown RBP7.42□□□□□ -1.22
RFX3-210ENST00000457373 RNF24Q9Y225 148 aa7.42□□□□□ -1.22
RFX3-210ENST00000457373 TRAV5A0A0B4J249 113 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 C17orf112F2Z3M2 114 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 SPRY2O43597 315 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 MALP21145 153 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 PSMB3P49720 205 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 MORN5Q5VZ52 161 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 TRPT1Q86TN4 253 aaKnown RBP7.41□□□□□ -1.22
RFX3-210ENST00000457373 SCGB1C1Q8TD33 95 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms