RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 GPR82Q96P67 336 aa6.93□□□□□ -1.3
RFX3-207ENST00000449190 RNF2Q99496 336 aa6.93□□□□□ -1.3
RFX3-207ENST00000449190 ARV1Q9H2C2 271 aa6.93□□□□□ -1.3
RFX3-207ENST00000449190 ZNF256Q9Y2P7 627 aaPredicted RBP6.93□□□□□ -1.3
RFX3-207ENST00000449190 TIMM9Q9Y5J7 89 aa6.93□□□□□ -1.3
RFX3-207ENST00000449190 U3KQE9 123 aa6.93□□□□□ -1.3
RFX3-207ENST00000449190 ZNF98A6NK75 572 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 BCL2L11O43521 198 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 BUB3O43684 328 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 MBP02144 154 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 GP9P14770 177 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 CXCL2P19875 107 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 GALR1P47211 349 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 CMC4P56277 68 aaPredicted RBP6.92□□□□□ -1.3
RFX3-207ENST00000449190 RPL7L1Q6DKI1 246 aaKnown RBP6.92□□□□□ -1.3
RFX3-207ENST00000449190 LINC00305Q7Z4B0 112 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 GATAD1Q8WUU5 269 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 SHANK2-AS3Q9BTD1 123 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 RSG1Q9BU20 258 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 ZNF471Q9BX82 626 aaPredicted RBP6.92□□□□□ -1.3
RFX3-207ENST00000449190 SLC25A39Q9BZJ4 359 aaPredicted RBP6.92□□□□□ -1.3
RFX3-207ENST00000449190 SLC25A22Q9H936 323 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 SELENOKQ9Y6D0 94 aa6.92□□□□□ -1.3
RFX3-207ENST00000449190 IGKV3-7A0A075B6H7 116 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 A0A1W2PPV4 95 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 OR4C46A6NHA9 309 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 TSPAN4O14817 238 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 RPL7P18124 248 aaKnown RBP6.91□□□□□ -1.3
RFX3-207ENST00000449190 ATP6V0CP27449 155 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 SERF2P84101 59 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 PATE2Q6UY27 113 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 GTSCR1Q86UQ5 136 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 WFDC3Q8IUB2 231 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 TMEM61Q8N0U2 210 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 PRR25Q96S07 402 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 SPAG8Q99932 426 aaPredicted RBP6.91□□□□□ -1.3
RFX3-207ENST00000449190 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 PSMG3Q9BT73 122 aaPredicted RBP6.91□□□□□ -1.3
RFX3-207ENST00000449190 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
RFX3-207ENST00000449190 IZUMO1RA6ND01 250 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 H3BRN7 92 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 TPT1P13693 172 aaKnown RBP6.9□□□□□ -1.3
RFX3-207ENST00000449190 ATF4P18848 351 aaPredicted RBP6.9□□□□□ -1.3
RFX3-207ENST00000449190 M6PRP20645 277 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 TFPI2P48307 235 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 RHOBP62745 196 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 LGALSLQ3ZCW2 172 aaPredicted RBP6.9□□□□□ -1.3
RFX3-207ENST00000449190 FAM78BQ5VT40 261 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 SAMD13Q5VXD3 122 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 FAM90A2PQ658T7 463 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 EIF5AL1Q6IS14 154 aaKnown RBP6.9□□□□□ -1.3
RFX3-207ENST00000449190 BPIFA4PQ86YQ2 179 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 GBGT1Q8N5D6 347 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 STXBP6Q8NFX7 210 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 OR2G3Q8NGZ4 309 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 LRRC20Q8TCA0 184 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 GLMPQ8WWB7 406 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 TMEM37Q8WXS4 190 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 UHRF2Q96PU4 802 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 SCRT1Q9BWW7 348 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 MRPL32Q9BYC8 188 aaKnown RBP6.9□□□□□ -1.3
RFX3-207ENST00000449190 SLC25A32Q9H2D1 315 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 MS4A6AQ9H2W1 248 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 CYTL1Q9NRR1 136 aa6.9□□□□□ -1.3
RFX3-207ENST00000449190 TRAV2A0A0B4J234 112 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 NHLRC4P0CG21 123 aaPredicted RBP6.89□□□□□ -1.31
RFX3-207ENST00000449190 ID1P41134 155 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 MEOX2P50222 304 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 TAS2R45P59539 299 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 CD300CQ08708 224 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 AKR1C8PQ5T2L2 129 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 LEMD1Q68G75 181 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 BAP18Q8IXM2 172 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 OR10G4Q8NGN3 311 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 OR10G9Q8NGN4 311 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 OR10G7Q8NGN6 311 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 NRN1Q9NPD7 142 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 FUT9Q9Y231 359 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 SMAD5-AS1Q9Y6J3 95 aa6.89□□□□□ -1.31
RFX3-207ENST00000449190 CD81P60033 236 aa6.88□□□□□ -1.31
RFX3-207ENST00000449190 SNRPD3P62318 126 aaKnown RBP6.88□□□□□ -1.31
RFX3-207ENST00000449190 GCSAMLQ5JQS6 135 aa6.88□□□□□ -1.31
RFX3-207ENST00000449190 FAM122CQ6P4D5 195 aa6.88□□□□□ -1.31
RFX3-207ENST00000449190 SLC51BQ86UW2 128 aa6.88□□□□□ -1.31
RFX3-207ENST00000449190 ACTR3CQ9C0K3 210 aaPredicted RBP6.88□□□□□ -1.31
RFX3-207ENST00000449190 SH3BGRL3Q9H299 93 aa6.88□□□□□ -1.31
RFX3-207ENST00000449190 SORL1Q92673 2214 aa6.88□□□□□ -1.31
RFX3-207ENST00000449190 TRAV5A0A0B4J249 113 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 OR11H12B2RN74 326 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 SEC11BP0C7V7 166 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 RAB2AP61019 212 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 GUK1Q16774 197 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 KHDC3LQ587J8 217 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 TMEM41BQ5BJD5 291 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 MIR17HGQ75NE6 70 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 C9orf62Q8N4C0 152 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
RFX3-207ENST00000449190 OR51M1Q9H341 326 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms