RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 P2RX4Q99571 388 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 RSG1Q9BU20 258 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 C20orf24Q9BUV8 137 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 MAP1LC3BQ9GZQ8 125 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 WDR61Q9GZS3 305 aaKnown RBP2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 NCOR1P1Q9H4R4 102 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 ENY2Q9NPA8 101 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 MANBALQ9NQG1 85 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 SIRT7Q9NRC8 400 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 KCNIP2Q9NS61 270 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 PSG8Q9UQ74 426 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 CSDC2Q9Y534 153 aaKnown RBP2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 PUS1Q9Y606 427 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 TTC28Q96AY4 2481 aa2.62□□□□□ -1.99
HMGB3P6-201ENST00000444896 INTS1Q8N201 2190 aaKnown RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 COL6A3P12111 3177 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 FRYLO94915 3013 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 TRGV10A0A0A0MS01 117 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 IGHV3-43A0A0B4J1X8 118 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 IGHV3-66A0A0C4DH42 116 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 CTXND1A0A1B0GTU2 59 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 COLCA2A8K830 154 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 C17orf98A8MV24 154 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 C9JQL5 133 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 MKRN2OSH3BPM6 223 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 H3BQ15 152 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 M0R1X1 148 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 ITGB1BP1O14713 200 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 RBFOX2O43251 390 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 YPEL1O60688 119 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 MPDU1O75352 247 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 ZNF737O75373 536 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 KRASP01116 189 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 SRP19P09132 144 aaKnown RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 NQO2P16083 231 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 RAB5AP20339 215 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 FGF7P21781 194 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 SSTR5P35346 364 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 G6PCP35575 357 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 CFHR2P36980 270 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 RPL35P42766 123 aaKnown RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 PSMB3P49720 205 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 EDDM3BP56851 147 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR2B8PP59922 312 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 SPCS3P61009 180 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 RAB11AP62491 216 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 RPL30P62888 115 aaKnown RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 TNFAIP6P98066 277 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 SRSF6Q13247 344 aaKnown RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 ACOT6Q3I5F7 207 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 DUX4L9Q6RFH8 374 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 LCN15Q6UWW0 184 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 Q6ZS92 163 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR10P1Q8NGE3 313 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR52E5Q8NH55 327 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 MBD3L1Q8WWY6 194 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 MALSU1Q96EH3 234 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 ADTRPQ96IZ2 230 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 YPEL2Q96QA6 119 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR2V2Q96R30 315 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR4C12Q96R67 309 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 ZNF251Q9BRH9 671 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 GGACTQ9BVM4 153 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 ACTR3CQ9C0K3 210 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 RPRMQ9NS64 109 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 SLC39A9Q9NUM3 307 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 GNG13Q9P2W3 67 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 VAX2Q9UIW0 290 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 CFAP54Q96N23 3096 aa2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 CHD3Q12873 2000 aaKnown RBP2.61□□□□□ -1.99
HMGB3P6-201ENST00000444896 CNOT1A5YKK6 2376 aaKnown RBP2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 EP300Q09472 2414 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 IGLV3-9A0A075B6K5 115 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 IGKV1D-17A0A075B6S4 117 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 hADV38S2A0JD32 116 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 SMCO3A2RU48 225 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 ZNF729A6NN14 1252 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 ZNF727A8MUV8 499 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 DEFB108AA8MXU0 73 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 TMEM250H0YL14 139 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 C15orf65H3BRN8 121 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 CYB5BO43169 146 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 CYB5R3P00387 301 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 MT-CO2P00403 227 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 HRASP01112 189 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 IFNA10P01566 189 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 ARG1P05089 322 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 SMIM6P0DI80 62 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 S100PP25815 95 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 MAS1LP35410 378 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 AKR1C3P42330 323 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 CDC34P49427 236 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 NUTF2P61970 127 aaKnown RBP2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 CCL20P78556 96 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 S100A12P80511 92 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 MEF2BQ02080 365 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 RAB31Q13636 194 aa2.6□□□□□ -1.99
HMGB3P6-201ENST00000444896 LTC4SQ16873 150 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms