RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PXDC1Q5TGL8 231 aa13.21□□□□□ -0.3
CCDC188-201ENST00000439765 EIF5AL1Q6IS14 154 aaKnown RBP13.21□□□□□ -0.3
CCDC188-201ENST00000439765 TCF24Q7RTU0 167 aa13.21□□□□□ -0.3
CCDC188-201ENST00000439765 VSIRQ9H7M9 311 aa13.21□□□□□ -0.3
CCDC188-201ENST00000439765 ORM2P19652 201 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 CRYBB3P26998 211 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 TFPI2P48307 235 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 TMED6Q8WW62 240 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 PBDC1Q9BVG4 233 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 SRD5A3Q9H8P0 318 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 C19orf73Q9NVV2 129 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 UBQLN2Q9UHD9 624 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 RYR3Q15413 4870 aa13.2□□□□□ -0.3
CCDC188-201ENST00000439765 A8MZ25 164 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 HYPMO75409 117 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 RPL11P62913 178 aaKnown RBP13.19□□□□□ -0.3
CCDC188-201ENST00000439765 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 GBGT1Q8N5D6 347 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 OR1L4Q8NGR5 311 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 OR1B1Q8NGR6 318 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 PHYHIPLQ96FC7 376 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 NARS2Q96I59 477 aaKnown RBP13.19□□□□□ -0.3
CCDC188-201ENST00000439765 TMEM231Q9H6L2 316 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
CCDC188-201ENST00000439765 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
CCDC188-201ENST00000439765 OR4C46A6NHA9 309 aa13.18□□□□□ -0.3
CCDC188-201ENST00000439765 MBP02144 154 aa13.18□□□□□ -0.3
CCDC188-201ENST00000439765 M6PRP20645 277 aa13.18□□□□□ -0.3
CCDC188-201ENST00000439765 ACOT6Q3I5F7 207 aaPredicted RBP13.18□□□□□ -0.3
CCDC188-201ENST00000439765 GCSAMLQ5JQS6 135 aa13.18□□□□□ -0.3
CCDC188-201ENST00000439765 FAM90A2PQ658T7 463 aa13.18□□□□□ -0.3
CCDC188-201ENST00000439765 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
CCDC188-201ENST00000439765 RCHY1Q96PM5 261 aa13.18□□□□□ -0.3
CCDC188-201ENST00000439765 DOK5Q9P104 306 aa13.18□□□□□ -0.3
CCDC188-201ENST00000439765 A0A1W2PS18 150 aa13.17□□□□□ -0.3
CCDC188-201ENST00000439765 C3orf84H3BNL1 204 aa13.17□□□□□ -0.3
CCDC188-201ENST00000439765 COX7A2P2O60397 106 aa13.17□□□□□ -0.3
CCDC188-201ENST00000439765 OR5G3P0C626 314 aa13.17□□□□□ -0.3
CCDC188-201ENST00000439765 AKR1C8PQ5T2L2 129 aa13.17□□□□□ -0.3
CCDC188-201ENST00000439765 GATAD1Q8WUU5 269 aa13.17□□□□□ -0.3
CCDC188-201ENST00000439765 PFDN5Q99471 154 aa13.17□□□□□ -0.3
CCDC188-201ENST00000439765 RABAC1Q9UI14 185 aa13.17□□□□□ -0.3
CCDC188-201ENST00000439765 RAB2AP61019 212 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 ODF3L2Q3SX64 289 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 TMEM41BQ5BJD5 291 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 TEX261Q6UWH6 196 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 ALKAL2Q6UX46 152 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 OR10G4Q8NGN3 311 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 OR10G9Q8NGN4 311 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 OR10G7Q8NGN6 311 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 GRAMD2BQ96HH9 432 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 RPRMQ9NS64 109 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 HIGD1AQ9Y241 93 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 UMAD1C9J7I0 102 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 WFDC3Q8IUB2 231 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 STXBP6Q8NFX7 210 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
CCDC188-201ENST00000439765 RBMY1BA6NDE4 496 aaKnown RBP13.15□□□□□ -0.3
CCDC188-201ENST00000439765 RBMY1EA6NEQ0 496 aaKnown RBP13.15□□□□□ -0.3
CCDC188-201ENST00000439765 CD5P06127 495 aa13.15□□□□□ -0.3
CCDC188-201ENST00000439765 RBMY1DP0C7P1 496 aaKnown RBP13.15□□□□□ -0.3
CCDC188-201ENST00000439765 SULT1A2P50226 295 aa13.15□□□□□ -0.3
CCDC188-201ENST00000439765 FAM78BQ5VT40 261 aa13.15□□□□□ -0.3
CCDC188-201ENST00000439765 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.3
CCDC188-201ENST00000439765 RPP25LQ8N5L8 163 aaKnown RBP13.15□□□□□ -0.3
CCDC188-201ENST00000439765 UHRF2Q96PU4 802 aa13.15□□□□□ -0.3
CCDC188-201ENST00000439765 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
CCDC188-201ENST00000439765 U3KQE9 123 aa13.15□□□□□ -0.3
CCDC188-201ENST00000439765 DNASE2O00115 360 aaPredicted RBP13.14□□□□□ -0.31
CCDC188-201ENST00000439765 S100A7P31151 101 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 RAB5CP51148 216 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 PAFAH1B2P68402 229 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 HAGHQ16775 308 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 ZNF680Q8NEM1 530 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 CITED4Q96RK1 184 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 TM2D3Q9BRN9 247 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 ZMAT4Q9H898 229 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 SEPSECSQ9HD40 501 aaKnown RBP13.14□□□□□ -0.31
CCDC188-201ENST00000439765 DNAH7Q8WXX0 4024 aa13.14□□□□□ -0.31
CCDC188-201ENST00000439765 H3BRN7 92 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 RHOBP62745 196 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 ZNF124Q15973 351 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 FAM74A1Q5RGS3 127 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 FAM122CQ6P4D5 195 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 GLMPQ8WWB7 406 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 SHANK2-AS3Q9BTD1 123 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 ACTR3CQ9C0K3 210 aaPredicted RBP13.13□□□□□ -0.31
CCDC188-201ENST00000439765 PFDN2Q9UHV9 154 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 FUT9Q9Y231 359 aa13.13□□□□□ -0.31
CCDC188-201ENST00000439765 A0A1W2PPV4 95 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 BUB3O43684 328 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 IFNA7P01567 189 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 IFITM2Q01629 132 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 MORN5Q5VZ52 161 aa13.12□□□□□ -0.31
CCDC188-201ENST00000439765 SPATA31B1PQ5VZV4 182 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms