RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TMEM182Q6ZP80 229 aaPredicted RBP13.22□□□□□ -0.29
AC004540.1-201ENST00000439120 S100A7AQ86SG5 101 aa13.22□□□□□ -0.29
AC004540.1-201ENST00000439120 C20orf173Q96LM9 149 aa13.22□□□□□ -0.29
AC004540.1-201ENST00000439120 SCRT1Q9BWW7 348 aa13.22□□□□□ -0.29
AC004540.1-201ENST00000439120 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
AC004540.1-201ENST00000439120 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 HYPMO75409 117 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 OR5G3P0C626 314 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 ANXA7P20073 488 aaKnown RBP13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 RRAS2P62070 204 aaPredicted RBP13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 SELENOTP62341 195 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 RRN3P1Q2M238 152 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 FAM222AQ5U5X8 452 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 SMIM8Q96KF7 97 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 NIPSNAP3BQ9BS92 247 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 SLC25A39Q9BZJ4 359 aaPredicted RBP13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 MGAT4CQ9UBM8 478 aa13.21□□□□□ -0.29
AC004540.1-201ENST00000439120 H3BRN7 92 aa13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 METTL15P1P0C7V9 234 aa13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 LINC00869P0C866 280 aa13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 RPL7P18124 248 aaKnown RBP13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 DLK1P80370 383 aa13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 IAH1Q2TAA2 248 aaPredicted RBP13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 OR10P1Q8NGE3 313 aa13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 GSKIPQ9P0R6 139 aa13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 DKK2Q9UBU2 259 aa13.2□□□□□ -0.3
AC004540.1-201ENST00000439120 HTN3P15516 51 aa13.19□□□□□ -0.3
AC004540.1-201ENST00000439120 C1orf158Q8N1D5 194 aa13.19□□□□□ -0.3
AC004540.1-201ENST00000439120 ZNF738Q8NE65 137 aa13.19□□□□□ -0.3
AC004540.1-201ENST00000439120 IGF2BP2-AS1Q96M15 143 aa13.19□□□□□ -0.3
AC004540.1-201ENST00000439120 SHANK2-AS3Q9BTD1 123 aa13.19□□□□□ -0.3
AC004540.1-201ENST00000439120 NPVFQ9HCQ7 196 aa13.19□□□□□ -0.3
AC004540.1-201ENST00000439120 INSP01308 110 aa13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 CNN1P51911 297 aaKnown RBP13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 CNPY1Q3B7I2 92 aa13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 IGFL4Q6B9Z1 124 aa13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 RNF182Q8N6D2 247 aa13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 POM121L12Q8N7R1 296 aa13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 LRRC20Q8TCA0 184 aa13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 RNF24Q9Y225 148 aa13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 YTHDF2Q9Y5A9 579 aaKnown RBP13.18□□□□□ -0.3
AC004540.1-201ENST00000439120 PMS2P5A8MQ11 134 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 FNDC10F2Z333 226 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 CCNKO75909 580 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 IL7P13232 177 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 BTCP35070 178 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 SPINK13Q1W4C9 94 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 TEPPQ6URK8 271 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 TMEM14EPQ6UXP3 125 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 UBE2DNLQ8IWF7 75 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 FAM210BQ96KR6 192 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 C17orf77Q96MU5 243 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 UHRF2Q96PU4 802 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 ARL6Q9H0F7 186 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 PPP1R14DQ9NXH3 145 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 VPS13DQ5THJ4 4388 aa13.17□□□□□ -0.3
AC004540.1-201ENST00000439120 A8MTW9 85 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 M0R2Z0 102 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 GOSR2O14653 212 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 TSC22D2O75157 780 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 TAS2R30P59541 319 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 PLP1P60201 277 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 DAD1P61803 113 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 ZNF846Q147U1 533 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 AMTNQ6UX39 209 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 OR11H7Q8NGC8 314 aa13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 SDHCQ99643 169 aaPredicted RBP13.16□□□□□ -0.3
AC004540.1-201ENST00000439120 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 L7N2F9 121 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 RHOBP62745 196 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 VAMP2P63027 116 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 OXA1LQ15070 435 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 ZNF546Q86UE3 836 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 MITD1Q8WV92 249 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
AC004540.1-201ENST00000439120 B2MP61769 119 aa13.14□□□□□ -0.31
AC004540.1-201ENST00000439120 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
AC004540.1-201ENST00000439120 PXDC1Q5TGL8 231 aa13.14□□□□□ -0.31
AC004540.1-201ENST00000439120 LINC00336Q6ZUF6 198 aa13.14□□□□□ -0.31
AC004540.1-201ENST00000439120 ARV1Q9H2C2 271 aa13.14□□□□□ -0.31
AC004540.1-201ENST00000439120 RCL1Q9Y2P8 373 aaKnown RBP13.14□□□□□ -0.31
AC004540.1-201ENST00000439120 A0A087X0K7 114 aa13.13□□□□□ -0.31
AC004540.1-201ENST00000439120 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
AC004540.1-201ENST00000439120 BOLA2-SMG1P6H3BVE0 249 aa13.13□□□□□ -0.31
AC004540.1-201ENST00000439120 K7EPK0 472 aa13.13□□□□□ -0.31
AC004540.1-201ENST00000439120 BAP18Q8IXM2 172 aa13.13□□□□□ -0.31
AC004540.1-201ENST00000439120 GGACTQ9BVM4 153 aa13.13□□□□□ -0.31
AC004540.1-201ENST00000439120 DNAH10Q8IVF4 4471 aa13.13□□□□□ -0.31
AC004540.1-201ENST00000439120 DNAH6Q9C0G6 4158 aa13.13□□□□□ -0.31
AC004540.1-201ENST00000439120 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
AC004540.1-201ENST00000439120 CCSO14618 274 aa13.12□□□□□ -0.31
AC004540.1-201ENST00000439120 LYRM1O43325 122 aa13.12□□□□□ -0.31
AC004540.1-201ENST00000439120 COX7A2P2O60397 106 aa13.12□□□□□ -0.31
AC004540.1-201ENST00000439120 MBPP02686 304 aaPredicted RBP13.12□□□□□ -0.31
AC004540.1-201ENST00000439120 CXCL3P19876 107 aa13.12□□□□□ -0.31
AC004540.1-201ENST00000439120 PSG3Q16557 428 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms