RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 IFNA21P01568 189 aa12.84□□□□□ -0.35
GTF3A-204ENST00000438571 SLC25A6P12236 298 aa12.84□□□□□ -0.35
GTF3A-204ENST00000438571 FAUP35544 74 aaKnown RBP12.84□□□□□ -0.35
GTF3A-204ENST00000438571 GALR1P47211 349 aa12.84□□□□□ -0.35
GTF3A-204ENST00000438571 MEOX2P50222 304 aa12.84□□□□□ -0.35
GTF3A-204ENST00000438571 CNN1P51911 297 aaKnown RBP12.84□□□□□ -0.35
GTF3A-204ENST00000438571 GGNBP1Q5YKI7 109 aa12.84□□□□□ -0.35
GTF3A-204ENST00000438571 OR11H7Q8NGC8 314 aa12.84□□□□□ -0.35
GTF3A-204ENST00000438571 OR1B1Q8NGR6 318 aa12.84□□□□□ -0.35
GTF3A-204ENST00000438571 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
GTF3A-204ENST00000438571 TEX48A0A1B0GUV7 120 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 ZNF705GA8MUZ8 300 aaPredicted RBP12.83□□□□□ -0.36
GTF3A-204ENST00000438571 H3BRN7 92 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 MED6O75586 246 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 CCNKO75909 580 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 DAD1P61803 113 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 AKR1C1Q04828 323 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 OXA1LQ15070 435 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 BAP18Q8IXM2 172 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 BPIFCQ8NFQ6 507 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 FAM210BQ96KR6 192 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 TMED3Q9Y3Q3 217 aa12.83□□□□□ -0.36
GTF3A-204ENST00000438571 LRP1BQ9NZR2 4599 aa12.82□□□□□ -0.36
GTF3A-204ENST00000438571 NOL3O60936 208 aaKnown RBP12.82□□□□□ -0.36
GTF3A-204ENST00000438571 ADAP1O75689 374 aa12.82□□□□□ -0.36
GTF3A-204ENST00000438571 MED14OSP0DP75 135 aa12.82□□□□□ -0.36
GTF3A-204ENST00000438571 FGL1Q08830 312 aa12.82□□□□□ -0.36
GTF3A-204ENST00000438571 ZNF575Q86XF7 245 aa12.82□□□□□ -0.36
GTF3A-204ENST00000438571 CIB3Q96Q77 187 aaPredicted RBP12.82□□□□□ -0.36
GTF3A-204ENST00000438571 TMEM208Q9BTX3 173 aa12.82□□□□□ -0.36
GTF3A-204ENST00000438571 TMEM147Q9BVK8 224 aa12.82□□□□□ -0.36
GTF3A-204ENST00000438571 SLC45A2Q9UMX9 530 aa12.82□□□□□ -0.36
GTF3A-204ENST00000438571 TRAV12-2A0A075B6T6 113 aa12.81□□□□□ -0.36
GTF3A-204ENST00000438571 POLR2GP62487 172 aaKnown RBP eCLIP12.81□□□□□ -0.36
GTF3A-204ENST00000438571 SLC25A39Q9BZJ4 359 aaPredicted RBP12.81□□□□□ -0.36
GTF3A-204ENST00000438571 PLAC8L1A1L4L8 177 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 SMCO3A2RU48 225 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 PMS2P5A8MQ11 134 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 CFDP00746 253 aaPredicted RBP12.8□□□□□ -0.36
GTF3A-204ENST00000438571 AZU1P20160 251 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 AP3S2P59780 193 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 FCN2Q15485 313 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 SAMD13Q5VXD3 122 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 CYP2G1PQ6ZSU1 146 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 OR4D5Q8NGN0 318 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 UHRF2Q96PU4 802 aa12.8□□□□□ -0.36
GTF3A-204ENST00000438571 SLC25A21Q9BQT8 299 aaPredicted RBP12.8□□□□□ -0.36
GTF3A-204ENST00000438571 INSP01308 110 aa12.79□□□□□ -0.36
GTF3A-204ENST00000438571 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
GTF3A-204ENST00000438571 TMEM144Q7Z5S9 345 aa12.79□□□□□ -0.36
GTF3A-204ENST00000438571 SHANK2-AS3Q9BTD1 123 aa12.79□□□□□ -0.36
GTF3A-204ENST00000438571 STRAPQ9Y3F4 350 aaKnown RBP12.79□□□□□ -0.36
GTF3A-204ENST00000438571 PIGBOS1A0A0B4J2F0 54 aa12.78□□□□□ -0.36
GTF3A-204ENST00000438571 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-204ENST00000438571 ID3Q02535 119 aa12.78□□□□□ -0.36
GTF3A-204ENST00000438571 RNF212Q495C1 297 aa12.78□□□□□ -0.36
GTF3A-204ENST00000438571 CCDC190Q86UF4 302 aa12.78□□□□□ -0.36
GTF3A-204ENST00000438571 ZNF738Q8NE65 137 aa12.78□□□□□ -0.36
GTF3A-204ENST00000438571 RBM38Q9H0Z9 239 aaKnown RBP12.78□□□□□ -0.36
GTF3A-204ENST00000438571 FLVCR2Q9UPI3 526 aa12.78□□□□□ -0.36
GTF3A-204ENST00000438571 C9orf170A2RU37 121 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 SSSCA1O60232 199 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 DUSP14O95147 198 aaKnown RBP12.77□□□□□ -0.37
GTF3A-204ENST00000438571 IL5P05113 134 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 LINC00869P0C866 280 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 DEFB130BP0DP73 79 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 DEFB130AP0DP74 79 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 GPR82Q96P67 336 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 KRTAP4-5Q9BYR2 181 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 PSENENQ9NZ42 101 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 HIGD1AQ9Y241 93 aa12.77□□□□□ -0.37
GTF3A-204ENST00000438571 A6NHS1 94 aa12.76□□□□□ -0.37
GTF3A-204ENST00000438571 BOLA2-SMG1P6H3BVE0 249 aa12.76□□□□□ -0.37
GTF3A-204ENST00000438571 HIST1H1AQ02539 215 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-204ENST00000438571 PATE2Q6UY27 113 aa12.76□□□□□ -0.37
GTF3A-204ENST00000438571 SRRQ9GZT4 340 aa12.76□□□□□ -0.37
GTF3A-204ENST00000438571 CCDC160A6NGH7 325 aa12.75□□□□□ -0.37
GTF3A-204ENST00000438571 SNRPCP09234 159 aaKnown RBP12.75□□□□□ -0.37
GTF3A-204ENST00000438571 OR5G3P0C626 314 aa12.75□□□□□ -0.37
GTF3A-204ENST00000438571 CXCL3P19876 107 aa12.75□□□□□ -0.37
GTF3A-204ENST00000438571 RAP2BP61225 183 aa12.75□□□□□ -0.37
GTF3A-204ENST00000438571 C1orf134Q5TEV5 83 aa12.75□□□□□ -0.37
GTF3A-204ENST00000438571 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
GTF3A-204ENST00000438571 DNAH5Q8TE73 4624 aa12.75□□□□□ -0.37
GTF3A-204ENST00000438571 APOBP04114 4563 aaKnown RBP12.75□□□□□ -0.37
GTF3A-204ENST00000438571 A0A087X0K7 114 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 LYRM9A8MSI8 78 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 MRPS12O15235 138 aaKnown RBP12.74□□□□□ -0.37
GTF3A-204ENST00000438571 HYPMO75409 117 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 METTL15P1P0C7V9 234 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 PLP1P60201 277 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 TNP2Q05952 138 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 SLC38A11Q08AI6 406 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 BAK1Q16611 211 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 TMEM14EPQ6UXP3 125 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 C15orf53Q8NAA6 179 aa12.74□□□□□ -0.37
GTF3A-204ENST00000438571 PARD6GQ9BYG4 376 aaPredicted RBP12.74□□□□□ -0.37
GTF3A-204ENST00000438571 F5H768 121 aa12.73□□□□□ -0.37
GTF3A-204ENST00000438571 NDUFB6O95139 128 aa12.73□□□□□ -0.37
GTF3A-204ENST00000438571 SCGB1D2O95969 90 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms