RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 FGL1Q08830 312 aa12.74□□□□□ -0.37
NUP50-208ENST00000430547 RBMY1FQ15415 496 aaKnown RBP12.74□□□□□ -0.37
NUP50-208ENST00000430547 C2CD4CQ8TF44 421 aa12.74□□□□□ -0.37
NUP50-208ENST00000430547 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
NUP50-208ENST00000430547 PLECQ15149 4684 aaKnown RBP12.74□□□□□ -0.37
NUP50-208ENST00000430547 C11orf94C9JXX5 98 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 GOSR2O14653 212 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 RPL7P18124 248 aaKnown RBP12.73□□□□□ -0.37
NUP50-208ENST00000430547 CAV2P51636 162 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 FXYD7P58549 80 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 SLC38A11Q08AI6 406 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 GSG1LQ6UXU4 331 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 ZNF546Q86UE3 836 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 C2orf50Q96LR7 162 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 CLUHP3Q96NS8 147 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 SHANK2-AS3Q9BTD1 123 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 GGACTQ9BVM4 153 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 ARL6Q9H0F7 186 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 DNAH1Q9P2D7 4330 aa12.73□□□□□ -0.37
NUP50-208ENST00000430547 K7EPK0 472 aa12.72□□□□□ -0.37
NUP50-208ENST00000430547 PLP1P60201 277 aa12.72□□□□□ -0.37
NUP50-208ENST00000430547 S100A10P60903 97 aa12.72□□□□□ -0.37
NUP50-208ENST00000430547 PSG9Q00887 426 aa12.72□□□□□ -0.37
NUP50-208ENST00000430547 ASAH1Q13510 395 aa12.72□□□□□ -0.37
NUP50-208ENST00000430547 FAM78BQ5VT40 261 aa12.72□□□□□ -0.37
NUP50-208ENST00000430547 ENKURQ8TC29 256 aa12.72□□□□□ -0.37
NUP50-208ENST00000430547 UHRF2Q96PU4 802 aa12.72□□□□□ -0.37
NUP50-208ENST00000430547 HYDINQ4G0P3 5121 aa12.71□□□□□ -0.37
NUP50-208ENST00000430547 IGHV3OR16-12A0A075B7B8 117 aa12.71□□□□□ -0.37
NUP50-208ENST00000430547 ELOA3CA0A087WX78 387 aaPredicted RBP12.71□□□□□ -0.37
NUP50-208ENST00000430547 A0A0J9YX75 114 aa12.71□□□□□ -0.37
NUP50-208ENST00000430547 F6UB75 175 aa12.71□□□□□ -0.37
NUP50-208ENST00000430547 DEDDO75618 318 aa12.71□□□□□ -0.37
NUP50-208ENST00000430547 HLA-DMBP28068 263 aa12.71□□□□□ -0.37
NUP50-208ENST00000430547 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
NUP50-208ENST00000430547 C20orf173Q96LM9 149 aa12.71□□□□□ -0.37
NUP50-208ENST00000430547 AGPAT2O15120 278 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 TCTAP57738 103 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 ARL16Q0P5N6 197 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 RAB31Q13636 194 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 ZNF709Q8N972 641 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 LRRC20Q8TCA0 184 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 SLC35B3Q9H1N7 401 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 ARV1Q9H2C2 271 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 GPN1Q9HCN4 374 aaPredicted RBP12.7□□□□□ -0.38
NUP50-208ENST00000430547 GOLT1BQ9Y3E0 138 aa12.7□□□□□ -0.38
NUP50-208ENST00000430547 TRAV10A0A0B4J240 114 aa12.69□□□□□ -0.38
NUP50-208ENST00000430547 SMIM9A6NGZ8 99 aa12.69□□□□□ -0.38
NUP50-208ENST00000430547 COX7A2P2O60397 106 aa12.69□□□□□ -0.38
NUP50-208ENST00000430547 ZNF705AQ6ZN79 300 aaPredicted RBP12.69□□□□□ -0.38
NUP50-208ENST00000430547 Q6ZTC4 211 aa12.69□□□□□ -0.38
NUP50-208ENST00000430547 ZNF738Q8NE65 137 aa12.69□□□□□ -0.38
NUP50-208ENST00000430547 NEU1Q99519 415 aa12.69□□□□□ -0.38
NUP50-208ENST00000430547 PTTG2Q9NZH5 202 aa12.69□□□□□ -0.38
NUP50-208ENST00000430547 TMEM189A5PLL7 270 aa12.68□□□□□ -0.38
NUP50-208ENST00000430547 ZNF705FA8MVS1 300 aaPredicted RBP12.68□□□□□ -0.38
NUP50-208ENST00000430547 IGLL5B9A064 214 aa12.68□□□□□ -0.38
NUP50-208ENST00000430547 UPK1BO75841 260 aa12.68□□□□□ -0.38
NUP50-208ENST00000430547 CST7O76096 145 aa12.68□□□□□ -0.38
NUP50-208ENST00000430547 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
NUP50-208ENST00000430547 ZNF705DP0CH99 300 aaPredicted RBP12.68□□□□□ -0.38
NUP50-208ENST00000430547 ZNF705BP0CI00 300 aaPredicted RBP12.68□□□□□ -0.38
NUP50-208ENST00000430547 LGALS9CQ6DKI2 356 aa12.68□□□□□ -0.38
NUP50-208ENST00000430547 STX12Q86Y82 276 aa12.68□□□□□ -0.38
NUP50-208ENST00000430547 RNF182Q8N6D2 247 aa12.68□□□□□ -0.38
NUP50-208ENST00000430547 C17orf77Q96MU5 243 aa12.68□□□□□ -0.38
NUP50-208ENST00000430547 FAM24AA6NFZ4 105 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 A6NHS1 94 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 CAMLGP49069 296 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 EMP1P54849 157 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 HBG1P69891 147 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 HBG2P69892 147 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 RAB32Q13637 225 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 IGFL4Q6B9Z1 124 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 LINC00305Q7Z4B0 112 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 MGST2Q99735 147 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 LYRM2Q9NU23 88 aaPredicted RBP12.67□□□□□ -0.38
NUP50-208ENST00000430547 UQCC1Q9NVA1 299 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 CELA1Q9UNI1 258 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 RFNGQ9Y644 331 aa12.67□□□□□ -0.38
NUP50-208ENST00000430547 A0A087X0K7 114 aa12.66□□□□□ -0.38
NUP50-208ENST00000430547 HBE1P02100 147 aa12.66□□□□□ -0.38
NUP50-208ENST00000430547 AMBPP02760 352 aa12.66□□□□□ -0.38
NUP50-208ENST00000430547 SULT1A1P50225 295 aa12.66□□□□□ -0.38
NUP50-208ENST00000430547 CNN1P51911 297 aaKnown RBP12.66□□□□□ -0.38
NUP50-208ENST00000430547 PATE2Q6UY27 113 aa12.66□□□□□ -0.38
NUP50-208ENST00000430547 Q6ZRG5 221 aa12.66□□□□□ -0.38
NUP50-208ENST00000430547 TRAV8-2A0A0B4J237 113 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 UBE2L5PA0A1B0GUS4 154 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 SPART-AS1P0CW21 52 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 S100A11P31949 105 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 BAXQ07812 192 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 C10orf113Q5VZT2 155 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 ZNF767PQ75MW2 155 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 NRARPQ7Z6K4 114 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 BPIFA4PQ86YQ2 179 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 C11orf1Q9H5F2 150 aa12.65□□□□□ -0.38
NUP50-208ENST00000430547 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms