RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ORM2P19652 201 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 FGL1Q08830 312 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 CLVS1Q8IUQ0 354 aaPredicted RBP12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 ZNF738Q8NE65 137 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 LINC01587Q99440 93 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 NAA50Q9GZZ1 169 aaKnown RBP12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 MIXL1Q9H2W2 232 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 SLC45A2Q9UMX9 530 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 BOLA2-SMG1P6H3BVE0 249 aa12.76□□□□□ -0.37
UPK3BP1-201ENST00000428678 HTN1P15515 57 aa12.76□□□□□ -0.37
UPK3BP1-201ENST00000428678 AKR1C4P17516 323 aa12.76□□□□□ -0.37
UPK3BP1-201ENST00000428678 TTC32Q5I0X7 151 aa12.76□□□□□ -0.37
UPK3BP1-201ENST00000428678 OR4D5Q8NGN0 318 aa12.76□□□□□ -0.37
UPK3BP1-201ENST00000428678 GPR82Q96P67 336 aa12.76□□□□□ -0.37
UPK3BP1-201ENST00000428678 TMEM147Q9BVK8 224 aa12.76□□□□□ -0.37
UPK3BP1-201ENST00000428678 Q9H8V8 135 aa12.76□□□□□ -0.37
UPK3BP1-201ENST00000428678 TRAV8-2A0A0B4J237 113 aa12.75□□□□□ -0.37
UPK3BP1-201ENST00000428678 KRTAP10-2P60368 255 aa12.75□□□□□ -0.37
UPK3BP1-201ENST00000428678 RHOBP62745 196 aa12.75□□□□□ -0.37
UPK3BP1-201ENST00000428678 BPIFCQ8NFQ6 507 aa12.75□□□□□ -0.37
UPK3BP1-201ENST00000428678 KRTAP1-5Q9BYS1 174 aa12.75□□□□□ -0.37
UPK3BP1-201ENST00000428678 PPP1R14DQ9NXH3 145 aa12.75□□□□□ -0.37
UPK3BP1-201ENST00000428678 ANXA3P12429 323 aa12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 GATA2P23769 480 aaPredicted RBP12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 SRPXP78539 464 aa12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 HIST1H1AQ02539 215 aaPredicted RBP12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 CTF1Q16619 201 aa12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 TMEM256Q8N2U0 113 aa12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 C16orf74Q96GX8 76 aa12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 SCGB3A2Q96PL1 93 aa12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 SCP2D1Q9UJQ7 156 aa12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 TIMM8BQ9Y5J9 83 aaPredicted RBP12.74□□□□□ -0.37
UPK3BP1-201ENST00000428678 S100A7P31151 101 aa12.73□□□□□ -0.37
UPK3BP1-201ENST00000428678 TAS2R60P59551 318 aa12.73□□□□□ -0.37
UPK3BP1-201ENST00000428678 DLK1P80370 383 aa12.73□□□□□ -0.37
UPK3BP1-201ENST00000428678 NOP10Q9NPE3 64 aaKnown RBP12.73□□□□□ -0.37
UPK3BP1-201ENST00000428678 OR5I1Q13606 314 aa12.72□□□□□ -0.37
UPK3BP1-201ENST00000428678 IL18Q14116 193 aa12.72□□□□□ -0.37
UPK3BP1-201ENST00000428678 TMEM182Q6ZP80 229 aaPredicted RBP12.72□□□□□ -0.37
UPK3BP1-201ENST00000428678 TMEM144Q7Z5S9 345 aa12.72□□□□□ -0.37
UPK3BP1-201ENST00000428678 GNPNAT1Q96EK6 184 aaPredicted RBP12.72□□□□□ -0.37
UPK3BP1-201ENST00000428678 Q9H3A6 140 aa12.72□□□□□ -0.37
UPK3BP1-201ENST00000428678 MCUBQ9NWR8 336 aa12.72□□□□□ -0.37
UPK3BP1-201ENST00000428678 TRAV26-1A0A087WT03 109 aa12.71□□□□□ -0.37
UPK3BP1-201ENST00000428678 CTDSP2O14595 271 aa12.71□□□□□ -0.37
UPK3BP1-201ENST00000428678 PITX3O75364 302 aa12.71□□□□□ -0.37
UPK3BP1-201ENST00000428678 AKR1C1Q04828 323 aa12.71□□□□□ -0.37
UPK3BP1-201ENST00000428678 OR8A1Q8NGG7 326 aa12.71□□□□□ -0.37
UPK3BP1-201ENST00000428678 OR10J6PQ8NGY7 276 aa12.71□□□□□ -0.37
UPK3BP1-201ENST00000428678 A0A0J9YY99 117 aa12.7□□□□□ -0.38
UPK3BP1-201ENST00000428678 ANKRD20A5PA0PJZ0 165 aa12.7□□□□□ -0.38
UPK3BP1-201ENST00000428678 MED6O75586 246 aa12.7□□□□□ -0.38
UPK3BP1-201ENST00000428678 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
UPK3BP1-201ENST00000428678 BTF3P20290 206 aaKnown RBP12.7□□□□□ -0.38
UPK3BP1-201ENST00000428678 RPP30P78346 268 aaKnown RBP12.7□□□□□ -0.38
UPK3BP1-201ENST00000428678 PIGBOS1A0A0B4J2F0 54 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 EPM2AB3EWF7 344 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 H3BRN7 92 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 WRBO00258 174 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 CTDSPLO15194 276 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 M6PRP20645 277 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 ZNF493Q6ZR52 646 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 RXFP4Q8TDU9 374 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 TMEM263Q8WUH6 116 aaKnown RBP12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 DIRAS2Q96HU8 199 aa12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 CIB3Q96Q77 187 aaPredicted RBP12.69□□□□□ -0.38
UPK3BP1-201ENST00000428678 DUXBA0A1W2PPF3 345 aa12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 RPL7P18124 248 aaKnown RBP12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 CXCL3P19876 107 aa12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 RAP2BP61225 183 aa12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 LRRC20Q8TCA0 184 aa12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 RNASE8Q8TDE3 154 aaKnown RBP12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 SHANK2-AS3Q9BTD1 123 aa12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 HIGD1AQ9Y241 93 aa12.68□□□□□ -0.38
UPK3BP1-201ENST00000428678 A0A1W2PPQ1 181 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 SMCO3A2RU48 225 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 ZNF701M0R085 212 aaPredicted RBP12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 ADAP1O75689 374 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 CDKN1BP46527 198 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 PSG3Q16557 428 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 ESRGQ1W209 222 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 SPANXN5Q5MJ07 72 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 ACOT7LQ6ZUV0 252 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 TMED4Q7Z7H5 227 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 ZNF503Q96F45 646 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 UPK3BQ9BT76 320 aa12.67□□□□□ -0.38
UPK3BP1-201ENST00000428678 H3BP45 60 aa12.66□□□□□ -0.38
UPK3BP1-201ENST00000428678 H7BYZ3 331 aa12.66□□□□□ -0.38
UPK3BP1-201ENST00000428678 SYNGR2O43760 224 aa12.66□□□□□ -0.38
UPK3BP1-201ENST00000428678 IL5P05113 134 aa12.66□□□□□ -0.38
UPK3BP1-201ENST00000428678 CYP2G1PQ6ZSU1 146 aa12.66□□□□□ -0.38
UPK3BP1-201ENST00000428678 RPUSD4Q96CM3 377 aaKnown RBP12.66□□□□□ -0.38
UPK3BP1-201ENST00000428678 RABL2AQ9UBK7 228 aaPredicted RBP12.66□□□□□ -0.38
UPK3BP1-201ENST00000428678 RABL2BQ9UNT1 228 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms