RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ZC2HC1BQ5TFG8 222 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM104BQ5XKR9 115 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM159AQ6UWV7 190 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 LINC00696Q6ZRV3 163 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM90A1Q86YD7 464 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 PLXDC1Q8IUK5 500 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TMEM116Q8NCL8 245 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 OR13A1Q8NGR1 328 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 DDB2Q92466 427 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TIMD4Q96H15 378 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TRGV9Q99603 122 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM173AQ9BQD7 235 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 MRPL20Q9BYC9 149 aaKnown RBP4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 GNG12Q9UBI6 72 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TP73-AS1Q9UF72 201 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 PROCRQ9UNN8 238 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 RALGAPA1Q6GYQ0 2036 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 A4D1N5 150 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 C5orf63A6NC05 138 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM90A27PA6NNH2 459 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 C9JAW5 83 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 D6R8Y8 96 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 H3BVH4 76 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 H7C1H1 209 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 SLC25A20O43772 301 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 SS18L1O75177 396 aaPredicted RBP4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 SNRNP200O75643 2136 aaKnown RBP4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 CEACAM4O75871 244 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 BRI3O95415 125 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 NCR2O95944 276 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 MT-CO3P00414 261 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 CRYGBP07316 175 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 NHLRC4P0CG21 123 aaPredicted RBP4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 P0DMU3 169 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM231AP0DMU4 169 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM231CP0DMU5 169 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 GATA3P23771 443 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 IFI27P40305 119 aaPredicted RBP4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 DLX6P56179 175 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 TMEM258P61165 79 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 SRSF9Q13242 221 aaKnown RBP eCLIP4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 TMEM196Q5HYL7 178 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 SCGB1D4Q6XE38 83 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 Q6ZR03 302 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 ABHD12Q8N2K0 398 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 C3orf22Q8N5N4 141 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 ANKRD29Q8N6D5 301 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 UBALD1Q8TB05 177 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 ZNF503Q96F45 646 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 ZC2HC1AQ96GY0 325 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 DEFB126Q9BYW3 111 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 AAMDCQ9H7C9 122 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 TMEM14CQ9P0S9 112 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 FZR1Q9UM11 496 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 HIGD1AQ9Y241 93 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 DOCK11Q5JSL3 2073 aa4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 PHF3Q92576 2039 aaKnown RBP4.5□□□□□ -1.69
VTI1BP4-201ENST00000427516 TRBV7-3A0A075B6L6 115 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 IGHV3OR15-7A0A075B7D8 119 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 F8WDY8 70 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 H3BMM0 161 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 H3BT86 120 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 CCDC179H3BU77 68 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 NPFFO15130 113 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 DUX1O43812 170 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 MRPL33O75394 65 aaKnown RBP4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 PPP1R17O96001 155 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 PRTN3P24158 256 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 CXCL5P42830 114 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 INSL3P51460 131 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 UBE2D1P51668 147 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 ORMDL2Q53FV1 153 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 SPRNQ5BIV9 151 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 SPINK9Q5DT21 86 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 ACP7Q6ZNF0 438 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 NFE4Q86UQ8 179 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 THAP8Q8NA92 274 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 C15orf53Q8NAA6 179 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 COPS9Q8WXC6 57 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 SRSF12Q8WXF0 261 aaKnown RBP4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 UBE2WQ96B02 151 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 FXYD5Q96DB9 178 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 LINC00526Q96FQ7 95 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM167A-AS1Q96KT0 104 aa4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 ZNF256Q9Y2P7 627 aaPredicted RBP4.49□□□□□ -1.69
VTI1BP4-201ENST00000427516 IGLV3-12A0A075B6K2 115 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 SPTY2D1-AS1A0A0U1RR47 76 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 F8VRH5 84 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 ATOX1O00244 68 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 EFNA2O43921 213 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 ORM1P02763 201 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 LIFP15018 202 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 ACP1P24666 158 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 COL8A2P25067 703 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 CD27P26842 260 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 PPIFP30405 207 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms