RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SIGLECL1Q8N7X8 197 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 NUP35Q8NFH5 326 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 RNF125Q96EQ8 232 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 RCHY1Q96PM5 261 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 TMUB1Q9BVT8 246 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 USP9YO00507 2555 aaPredicted RBP9.1□□□□□ -0.95
UBR4-207ENST00000425413 CSMD2Q7Z408 3487 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 ZNF253O75346 499 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 PAX1P15863 534 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 SAA4P35542 130 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 EFNA4P52798 201 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 SLAQ13239 276 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 ZNF491Q8N8L2 437 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 NPBQ8NG41 125 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 GPR82Q96P67 336 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 GNB1LQ9BYB4 327 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 TRAV9-1A0A075B6T8 112 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 AMY1AP04745 511 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 PAFAH1B2P68402 229 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 RPL19P84098 196 aaKnown RBP9.1□□□□□ -0.95
UBR4-207ENST00000425413 C1orf194Q5T5A4 169 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 CCDC144NLQ6NUI1 221 aa9.1□□□□□ -0.95
UBR4-207ENST00000425413 VWC2LB2RUY7 222 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 BMPR1BO00238 502 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 NTF3P20783 257 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 AMTP48728 403 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 GDF5OSQ5U4N7 250 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 IGFL4Q6B9Z1 124 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 ZNF562Q6V9R5 426 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 OR2D3Q8NGH3 330 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 SIRPDQ9H106 197 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 MRPL27Q9P0M9 148 aaKnown RBP9.09□□□□□ -0.95
UBR4-207ENST00000425413 CSPG4Q6UVK1 2322 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 LRRK2Q5S007 2527 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 IZUMO1RA6ND01 250 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 APCSP02743 223 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 HIST1H1EP10412 219 aaKnown RBP9.09□□□□□ -0.95
UBR4-207ENST00000425413 PLP1P60201 277 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 TMEM219Q86XT9 240 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 PGLYRP4Q96LB8 373 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 C2orf88Q9BSF0 95 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 RNF114Q9Y508 228 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 LINC01548A6NM66 108 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 BATFQ16520 125 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 BPIFA4PQ86YQ2 179 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 FAM19A2Q8N3H0 131 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 OR4F17Q8NGA8 305 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.95
UBR4-207ENST00000425413 IGHV2-70DA0A0C4DH43 119 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 P01737 135 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 HLA-DRB1P01911 266 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 G0S2P27469 103 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 LMO4P61968 165 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 WDR73Q6P4I2 378 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 DAZAP1Q96EP5 407 aaKnown RBP9.08□□□□□ -0.96
UBR4-207ENST00000425413 GRAMD2BQ96HH9 432 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 C21orf62Q9NYP8 219 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 TBL2Q9Y4P3 447 aaKnown RBP9.08□□□□□ -0.96
UBR4-207ENST00000425413 IGLV11-55A0A075B6I3 123 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 IGHV3OR16-13A0A075B7E8 117 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 IGHV7-81A0A0B4J1V7 117 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 IGHV3-74A0A0B4J1X5 117 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 MFAP4P55083 255 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 BRD3OSQ6XYD6 125 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 C7orf69Q9H7B7 122 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 FBXL7Q9UJT9 491 aa9.08□□□□□ -0.96
UBR4-207ENST00000425413 DOPEY1Q5JWR5 2465 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 G3V318 75 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 IGHV4-39P01824 125 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 BRS3P32247 399 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 MBD6Q96DN6 1003 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 CHRDL1Q9BU40 450 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 VAMP8Q9BV40 100 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 TPPP3Q9BW30 176 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 OTORQ9NRC9 128 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 TRBV19A0A075B6N1 114 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 TRBV9A0A0B4J1U6 114 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 IGHV3-66A0A0C4DH42 116 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
UBR4-207ENST00000425413 M0R143 59 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 TCAPO15273 167 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 TOMM40O96008 361 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 COL8A1P27658 744 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 PAX2Q02962 417 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 UNQ5815/PRO19632Q6UWF5 114 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 Q8N9W7 124 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 TSKUQ8WUA8 353 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 FMC1Q96HJ9 113 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 ZNF462Q96JM2 2506 aa9.07□□□□□ -0.96
UBR4-207ENST00000425413 H3BRN7 92 aa9.06□□□□□ -0.96
UBR4-207ENST00000425413 LTAP01374 205 aa9.06□□□□□ -0.96
UBR4-207ENST00000425413 HLA-DQA1P01909 254 aa9.06□□□□□ -0.96
UBR4-207ENST00000425413 MT-ND6P03923 174 aa9.06□□□□□ -0.96
UBR4-207ENST00000425413 FAM106CPP0CH98 169 aa9.06□□□□□ -0.96
UBR4-207ENST00000425413 EGR2P11161 476 aaPredicted RBP9.06□□□□□ -0.96
UBR4-207ENST00000425413 SFTPCP11686 197 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms