RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 BRD3OSQ6XYD6 125 aa12.03□□□□□ -0.48
LRCH3-202ENST00000414675 LURAP1LQ8IV03 231 aa12.03□□□□□ -0.48
LRCH3-202ENST00000414675 ATG101Q9BSB4 218 aa12.03□□□□□ -0.48
LRCH3-202ENST00000414675 FBXL7Q9UJT9 491 aa12.03□□□□□ -0.48
LRCH3-202ENST00000414675 TRAV30A0A087WSZ9 112 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 TRBV9A0A0B4J1U6 114 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 OR2T8A6NH00 312 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 MRPS12O15235 138 aaKnown RBP12.02□□□□□ -0.49
LRCH3-202ENST00000414675 SCGB1D1O95968 90 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 TCRAP04437 139 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 FCGR2BP31994 310 aaPredicted RBP12.02□□□□□ -0.49
LRCH3-202ENST00000414675 UBE2G1P62253 170 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 SLC35B1P78383 322 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 CLEC2AQ6UVW9 174 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 TMEM219Q86XT9 240 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 C14orf144Q96I85 54 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 TMEM68Q96MH6 324 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 TRAV40A0A0B4J280 105 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 IGHV1-69DA0A0B4J2H0 117 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 IGHV1-69P01742 117 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 PRB4P10163 310 aaPredicted RBP12.02□□□□□ -0.49
LRCH3-202ENST00000414675 UNQ5815/PRO19632Q6UWF5 114 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 REC114Q7Z4M0 266 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 TMUB1Q9BVT8 246 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 OTORQ9NRC9 128 aa12.02□□□□□ -0.49
LRCH3-202ENST00000414675 SOX21Q9Y651 276 aaPredicted RBP12.02□□□□□ -0.49
LRCH3-202ENST00000414675 SMIM27A0A1W2PRY6 76 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 NUPR1O60356 82 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 IGLC2P0DOY2 106 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 PRR27Q6MZM9 219 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 Q71RC1 249 aaPredicted RBP12.01□□□□□ -0.49
LRCH3-202ENST00000414675 ZNF664Q8N3J9 261 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 NUDT10Q8NFP7 164 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 FAM110DQ8TAY7 271 aaPredicted RBP12.01□□□□□ -0.49
LRCH3-202ENST00000414675 MBD6Q96DN6 1003 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 NUDT11Q96G61 164 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 NOL4LQ96MY1 436 aaPredicted RBP12.01□□□□□ -0.49
LRCH3-202ENST00000414675 MS4A10Q96PG2 267 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 CHRDL1Q9BU40 450 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 THYN1Q9P016 225 aa12.01□□□□□ -0.49
LRCH3-202ENST00000414675 G3V318 75 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 NDUFS8O00217 210 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 CTSGP08311 255 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 WDR73Q6P4I2 378 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 BAGE3Q86Y29 109 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 PIFOQ8TCI5 191 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 ZNF414Q96IQ9 312 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 MLST8Q9BVC4 326 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 GNB1LQ9BYB4 327 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 UBR5O95071 2799 aaPredicted RBP12□□□□□ -0.49
LRCH3-202ENST00000414675 TRBV19A0A075B6N1 114 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 TRAV8-1A0A0A6YYK1 113 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 IGHV4-38-2P0DP08 117 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 TPPP2P59282 170 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 RAB4BP61018 213 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 LINC00322Q6ZN03 302 aaPredicted RBP12□□□□□ -0.49
LRCH3-202ENST00000414675 FAM231DQ6ZW35 169 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 BPIFA4PQ86YQ2 179 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 C5orf56Q8N8D9 126 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 NAT8BQ9UHF3 227 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 POLQO75417 2590 aa12□□□□□ -0.49
LRCH3-202ENST00000414675 CSMD2Q7Z408 3487 aa11.99□□□□□ -0.49
LRCH3-202ENST00000414675 GPR82Q96P67 336 aa11.99□□□□□ -0.49
LRCH3-202ENST00000414675 CENPEQ02224 2701 aa11.99□□□□□ -0.49
LRCH3-202ENST00000414675 MT-ND6P03923 174 aa11.99□□□□□ -0.49
LRCH3-202ENST00000414675 SRSF1Q07955 248 aaKnown RBP eCLIP11.99□□□□□ -0.49
LRCH3-202ENST00000414675 COX19Q49B96 90 aa11.99□□□□□ -0.49
LRCH3-202ENST00000414675 SIGLEC15Q6ZMC9 328 aa11.99□□□□□ -0.49
LRCH3-202ENST00000414675 FBN2P35556 2912 aa11.99□□□□□ -0.49
LRCH3-202ENST00000414675 KMT2BQ9UMN6 2715 aaPredicted RBP11.98□□□□□ -0.49
LRCH3-202ENST00000414675 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.98□□□□□ -0.497e-7■■■□□ 18.9
LRCH3-202ENST00000414675 IGHV3-35A0A0C4DH35 117 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 SERF1AO75920 110 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 LTAP01374 205 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 IGLV2-11P01706 119 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 AMY1AP04745 511 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 PAFAH1B2P68402 229 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 C15orf32Q32M92 178 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 MRPL54Q6P161 138 aaKnown RBP11.98□□□□□ -0.49
LRCH3-202ENST00000414675 OR4F17Q8NGA8 305 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 FMC1Q96HJ9 113 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 ZMAT5Q9UDW3 170 aaKnown RBP11.98□□□□□ -0.49
LRCH3-202ENST00000414675 IGHV3OR16-8A0A075B7F1 116 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 RHOGP84095 191 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 GOLT1AQ6ZVE7 132 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 ZNF502Q8TBZ5 544 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 NAGKQ9UJ70 344 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 TP53TG3Q9ULZ0 132 aa11.98□□□□□ -0.49
LRCH3-202ENST00000414675 ANKRD17O75179 2603 aaKnown RBP11.97□□□□□ -0.49
LRCH3-202ENST00000414675 USP9YO00507 2555 aaPredicted RBP11.97□□□□□ -0.49
LRCH3-202ENST00000414675 A8MWP6 167 aa11.97□□□□□ -0.49
LRCH3-202ENST00000414675 KLK9Q2XQG4 91 aa11.97□□□□□ -0.49
LRCH3-202ENST00000414675 TMEM136Q6ZRR5 245 aa11.97□□□□□ -0.49
LRCH3-202ENST00000414675 Q86TA4 180 aa11.97□□□□□ -0.49
LRCH3-202ENST00000414675 KLK9Q9UKQ9 250 aa11.97□□□□□ -0.49
LRCH3-202ENST00000414675 CSPG4Q6UVK1 2322 aa11.97□□□□□ -0.49
LRCH3-202ENST00000414675 ZNF705FA8MVS1 300 aaPredicted RBP11.97□□□□□ -0.49
LRCH3-202ENST00000414675 ZNF705DP0CH99 300 aaPredicted RBP11.97□□□□□ -0.49
LRCH3-202ENST00000414675 ZNF705BP0CI00 300 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms