RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	GALR1	P47211	349 aa		9.88	□□□□□ -0.83
SF1-206	ENST00000413725	STXBP6	Q8NFX7	210 aa		9.88	□□□□□ -0.83
SF1-206	ENST00000413725	GNPNAT1	Q96EK6	184 aa	Predicted RBP	9.88	□□□□□ -0.83
SF1-206	ENST00000413725	PSMG3	Q9BT73	122 aa	Predicted RBP	9.88	□□□□□ -0.83
SF1-206	ENST00000413725	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	9.88	□□□□□ -0.83
SF1-206	ENST00000413725	DNAH3	Q8TD57	4116 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	TRAV2	A0A0B4J234	112 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	BCL2L11	O43521	198 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	ATP6V0C	P27449	155 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	TFPI2	P48307	235 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	CD81	P60033	236 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	ACOT6	Q3I5F7	207 aa	Predicted RBP	9.87	□□□□□ -0.83
SF1-206	ENST00000413725	LEMD1	Q68G75	181 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	TMUB2	Q71RG4	321 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	GBGT1	Q8N5D6	347 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	SLC25A32	Q9H2D1	315 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	MS4A6A	Q9H2W1	248 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	AGRN	O00468	2067 aa		9.87	□□□□□ -0.83
SF1-206	ENST00000413725	PRB2	P02812	416 aa	Predicted RBP	9.86	□□□□□ -0.83
SF1-206	ENST00000413725	ATF4	P18848	351 aa	Predicted RBP	9.86	□□□□□ -0.83
SF1-206	ENST00000413725	CMC4	P56277	68 aa	Predicted RBP	9.86	□□□□□ -0.83
SF1-206	ENST00000413725	EIF5A	P63241	154 aa	Known RBP	9.86	□□□□□ -0.83
SF1-206	ENST00000413725	SERF2	P84101	59 aa		9.86	□□□□□ -0.83
SF1-206	ENST00000413725	DEFA6	Q01524	100 aa		9.86	□□□□□ -0.83
SF1-206	ENST00000413725	CD300C	Q08708	224 aa		9.86	□□□□□ -0.83
SF1-206	ENST00000413725	FAM78B	Q5VT40	261 aa		9.86	□□□□□ -0.83
SF1-206	ENST00000413725	WFDC3	Q8IUB2	231 aa		9.86	□□□□□ -0.83
SF1-206	ENST00000413725	OR2G3	Q8NGZ4	309 aa		9.86	□□□□□ -0.83
SF1-206	ENST00000413725	MRPL32	Q9BYC8	188 aa	Known RBP	9.86	□□□□□ -0.83
SF1-206	ENST00000413725	NRN1	Q9NPD7	142 aa		9.86	□□□□□ -0.83
SF1-206	ENST00000413725	CYTL1	Q9NRR1	136 aa		9.86	□□□□□ -0.83
SF1-206	ENST00000413725	MB	P02144	154 aa		9.85	□□□□□ -0.83
SF1-206	ENST00000413725	M6PR	P20645	277 aa		9.85	□□□□□ -0.83
SF1-206	ENST00000413725	C4BPB	P20851	252 aa		9.85	□□□□□ -0.83
SF1-206	ENST00000413725	MEOX2	P50222	304 aa		9.85	□□□□□ -0.83
SF1-206	ENST00000413725	RHOB	P62745	196 aa		9.85	□□□□□ -0.83
SF1-206	ENST00000413725	GCSAML	Q5JQS6	135 aa		9.85	□□□□□ -0.83
SF1-206	ENST00000413725	SAMD13	Q5VXD3	122 aa		9.85	□□□□□ -0.83
SF1-206	ENST00000413725	BPIFA4P	Q86YQ2	179 aa		9.85	□□□□□ -0.83
SF1-206	ENST00000413725	ZNF471	Q9BX82	626 aa	Predicted RBP	9.85	□□□□□ -0.83
SF1-206	ENST00000413725		K7EQG2	157 aa		9.84	□□□□□ -0.83
SF1-206	ENST00000413725	CD7	P09564	240 aa		9.84	□□□□□ -0.83
SF1-206	ENST00000413725	LGALSL	Q3ZCW2	172 aa	Predicted RBP	9.84	□□□□□ -0.83
SF1-206	ENST00000413725	MORN5	Q5VZ52	161 aa		9.84	□□□□□ -0.83
SF1-206	ENST00000413725	SH3BGRL3	Q9H299	93 aa		9.84	□□□□□ -0.83
SF1-206	ENST00000413725	FUT9	Q9Y231	359 aa		9.84	□□□□□ -0.83
SF1-206	ENST00000413725	RFNG	Q9Y644	331 aa		9.84	□□□□□ -0.83
SF1-206	ENST00000413725		A0A1W2PPV4	95 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	OR11H12	B2RN74	326 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	TAS2R45	P59539	299 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	SNRPD3	P62318	126 aa	Known RBP	9.83	□□□□□ -0.84
SF1-206	ENST00000413725	MIR17HG	Q75NE6	70 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	OR10G4	Q8NGN3	311 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	OR10G9	Q8NGN4	311 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	OR10G7	Q8NGN6	311 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	DCANP1	Q8TF63	244 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	FAM110A	Q9BQ89	295 aa		9.83	□□□□□ -0.84
SF1-206	ENST00000413725	SEPSECS	Q9HD40	501 aa	Known RBP	9.83	□□□□□ -0.84
SF1-206	ENST00000413725		A0A087X0K7	114 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	TRAV5	A0A0B4J249	113 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725		K7EIL1	84 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	SPP1	P10451	314 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	TPT1	P13693	172 aa	Known RBP	9.82	□□□□□ -0.84
SF1-206	ENST00000413725	ID1	P41134	155 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	RAB2A	P61019	212 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	KHDC3L	Q587J8	217 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	TMEM41B	Q5BJD5	291 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	AKR1C8P	Q5T2L2	129 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	SPATA31B1P	Q5VZV4	182 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	FAM122C	Q6P4D5	195 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725		Q8N1Y9	231 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	C9orf62	Q8N4C0	152 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	MRAP	Q8TCY5	172 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	TMEM14C	Q9P0S9	112 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	UBQLN2	Q9UHD9	624 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	SMAD5-AS1	Q9Y6J3	95 aa		9.82	□□□□□ -0.84
SF1-206	ENST00000413725	ISLR	O14498	428 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	MRPS12	O15235	138 aa	Known RBP	9.81	□□□□□ -0.84
SF1-206	ENST00000413725	ZNF688	P0C7X2	276 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	CDC34	P49427	236 aa	Predicted RBP	9.81	□□□□□ -0.84
SF1-206	ENST00000413725	PSMB3	P49720	205 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	ODF3L2	Q3SX64	289 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	DEFB121	Q5J5C9	76 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	LCN15	Q6UWW0	184 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	BAP18	Q8IXM2	172 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	STOML3	Q8TAV4	291 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	LRRC20	Q8TCA0	184 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	C16orf92	Q96LL3	132 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	SLC25A2	Q9BXI2	301 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	TUBA4B	Q9H853	241 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	MAP6D1	Q9H9H5	199 aa		9.81	□□□□□ -0.84
SF1-206	ENST00000413725	OR7C2	O60412	319 aa		9.8	□□□□□ -0.84
SF1-206	ENST00000413725	SEC11B	P0C7V7	166 aa		9.8	□□□□□ -0.84
SF1-206	ENST00000413725	IGLC2	P0DOY2	106 aa		9.8	□□□□□ -0.84
SF1-206	ENST00000413725	DEFB131A	P59861	70 aa		9.8	□□□□□ -0.84
SF1-206	ENST00000413725	GUK1	Q16774	197 aa		9.8	□□□□□ -0.84
SF1-206	ENST00000413725	EIF5AL1	Q6IS14	154 aa	Known RBP	9.8	□□□□□ -0.84
SF1-206	ENST00000413725	SLC51B	Q86UW2	128 aa		9.8	□□□□□ -0.84
SF1-206	ENST00000413725	FAM24B	Q8N5W8	94 aa		9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms