RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 RPL12P30050 165 aaKnown RBP5.7□□□□□ -1.5
CPSF4-202ENST00000412686 RAP2BP61225 183 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 SELENOTP62341 195 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 ATP6V1FQ16864 119 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 GCSAMLQ5JQS6 135 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 PSMG4Q5JS54 123 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 SHANK2-AS3Q9BTD1 123 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 NPCDR1Q9BY65 106 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 WDR61Q9GZS3 305 aaKnown RBP5.7□□□□□ -1.5
CPSF4-202ENST00000412686 NRN1Q9NPD7 142 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 SLC39A9Q9NUM3 307 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 RFNGQ9Y644 331 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 PXMP4Q9Y6I8 212 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 TRAV5A0A0B4J249 113 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 COX7A2P2O60397 106 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 NUP62P37198 522 aaPredicted RBP5.69□□□□□ -1.5
CPSF4-202ENST00000412686 AP2S1P53680 142 aaPredicted RBP5.69□□□□□ -1.5
CPSF4-202ENST00000412686 B2MP61769 119 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 FGL1Q08830 312 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 C1orf194Q5T5A4 169 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 IGFL4Q6B9Z1 124 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 LINC00305Q7Z4B0 112 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 OR2T35Q8NGX2 323 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 RCHY1Q96PM5 261 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 ATP5SQ99766 215 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 RSG1Q9BU20 258 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 FBXL17Q9UF56 701 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 U3KQK5 164 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 FXYD6-FXYD2A0A087WZ82 144 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 TRAV8-2A0A0B4J237 113 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 RNF222A6NCQ9 220 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 H3BTX0 84 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 MRPS12O15235 138 aaKnown RBP5.68□□□□□ -1.5
CPSF4-202ENST00000412686 EIF3GO75821 320 aaKnown RBP eCLIP5.68□□□□□ -1.5
CPSF4-202ENST00000412686 NHLRC4P0CG21 123 aaPredicted RBP5.68□□□□□ -1.5
CPSF4-202ENST00000412686 HLA-DMBP28068 263 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 RPL29P47914 159 aaKnown RBP5.68□□□□□ -1.5
CPSF4-202ENST00000412686 RAB31Q13636 194 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 GDF5OSQ5U4N7 250 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 C10orf113Q5VZT2 155 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 SPATA31B1PQ5VZV4 182 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 Q6ZRG5 221 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 LINC00052Q96N35 136 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 PFDN2Q9UHV9 154 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 AGRNO00468 2067 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 F6UB75 175 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 MPDU1O75352 247 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 RPL7P18124 248 aaKnown RBP5.67□□□□□ -1.5
CPSF4-202ENST00000412686 C4BPBP20851 252 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 GALR1P47211 349 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 DEFB135Q30KP9 77 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 PXDC1Q5TGL8 231 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 RNF182Q8N6D2 247 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 C16orf92Q96LL3 132 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 AQP10Q96PS8 301 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 SPATA25Q9BR10 227 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 ZMAT4Q9H898 229 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 DNAJC4Q9NNZ3 241 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 hCG_2014768A0A024R1R8 64 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 H3BQ15 152 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 SLC17A3O00476 420 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ARPC5O15511 151 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 IGKV3-20P01619 116 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ZNF705DP0CH99 300 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ZNF705BP0CI00 300 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ATF4P18848 351 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 PSMB3P49720 205 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 APOC4P55056 127 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 CMC4P56277 68 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 FAM78BQ5VT40 261 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 Q6ZNX1 250 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 MIR17HGQ75NE6 70 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 TRPT1Q86TN4 253 aaKnown RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 STHQ8IWL8 128 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 OR11H4Q8NGC9 324 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 OR1L4Q8NGR5 311 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 SCGB1C1Q8TD33 95 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ASB13Q8WXK3 278 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 PFDN5Q99471 154 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 OVOL2Q9BRP0 275 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 SEPSECSQ9HD40 501 aaKnown RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 TNFSF18Q9UNG2 199 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 A0A087X0K7 114 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 H3BMM0 161 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 ISLRO14498 428 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 CA1P00915 261 aaPredicted RBP5.65□□□□□ -1.5
CPSF4-202ENST00000412686 IFNA5P01569 189 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 GIG44P09565 113 aaPredicted RBP5.65□□□□□ -1.5
CPSF4-202ENST00000412686 IGLC2P0DOY2 106 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 PYYP10082 97 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 S100A7P31151 101 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 FXYD7P58549 80 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 FFAR4Q5NUL3 377 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 ZNF709Q8N972 641 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms