RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 FABP1P07148 127 aa1.32□□□□□ -2.2
RNU2-28P-201ENST00000410457 ZNF93P35789 620 aaPredicted RBP1.32□□□□□ -2.2
RNU2-28P-201ENST00000410457 PATE2Q6UY27 113 aa1.32□□□□□ -2.2
RNU2-28P-201ENST00000410457 IFT20Q8IY31 132 aa1.32□□□□□ -2.2
RNU2-28P-201ENST00000410457 PPTC7Q8NI37 304 aa1.32□□□□□ -2.2
RNU2-28P-201ENST00000410457 CHCHD2Q9Y6H1 151 aaPredicted RBP1.32□□□□□ -2.2
RNU2-28P-201ENST00000410457 TNRC6AQ8NDV7 1962 aaKnown RBP1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 TCRBV4S1A1TA0A5B7 111 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 C17orf112F2Z3M2 114 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 GLRXP35754 106 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 PLCXD2Q0VAA5 305 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 LTC4SQ16873 150 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 C1orf140Q5VVS0 124 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 CLECL1Q8IZS7 167 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 FAM24BQ8N5W8 94 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 SMPXQ9UHP9 88 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 ATPIF1Q9UII2 106 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 NUP98P52948 1817 aa1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 TNRC6BQ9UPQ9 1833 aaKnown RBP1.31□□□□□ -2.2
RNU2-28P-201ENST00000410457 KMT2BQ9UMN6 2715 aaPredicted RBP1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 ZNF736B4DX44 427 aaPredicted RBP1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 E7EUB6 86 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 GPR31O00270 319 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 GEMIN2O14893 280 aaKnown RBP1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 OR10J4P0C629 311 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 DSCR4P56555 118 aaPredicted RBP1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 TMEM78Q5T7P6 136 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 TEX261Q6UWH6 196 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 PHF5AQ7RTV0 110 aaKnown RBP1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 U3KQ87 197 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 TNS3Q68CZ2 1445 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 NCAPD3P42695 1498 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 CAMSAP2Q08AD1 1489 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 CEP164Q9UPV0 1460 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 HEATR1Q9H583 2144 aaKnown RBP1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 ADGRB2O60241 1585 aa1.3□□□□□ -2.2
RNU2-28P-201ENST00000410457 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 MAP1LC3B2A6NCE7 125 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 INE1O15225 51 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 CXCL1P09341 107 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 FREM3P0C091 2139 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 TMBIM6P55061 237 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 ARPP19P56211 112 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 RTL8BQ17RB0 113 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 FKBP1CQ5VVH2 108 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 DCUN1D2Q6PH85 259 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 C2orf82Q6UX34 121 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 C4orf22Q6V702 233 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 Q8N814 137 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 OR5D16Q8NGK9 328 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 LINC00526Q96FQ7 95 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 TP53RKQ96S44 253 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 SELENOSQ9BQE4 189 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 MAP1LC3BQ9GZQ8 125 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 CACYBPQ9HB71 228 aaKnown RBP1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 OR52A1Q9UKL2 312 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 CD109Q6YHK3 1445 aa1.29□□□□□ -2.2
RNU2-28P-201ENST00000410457 NCOA6Q14686 2063 aaPredicted RBP1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 A0A087WSZ3 146 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 CCDC160A6NGH7 325 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 PGRMC1O00264 195 aaKnown RBP1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 HIST1H2BKO60814 126 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 IFNA4P05014 189 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 HIST1H2BJP06899 126 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 RAB5CP51148 216 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 ST6GALNAC3Q8NDV1 305 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 OR5D14Q8NGL3 314 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 PATE1Q8WXA2 126 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 ZNF714Q96N38 554 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 MRPL57Q9BQC6 102 aaKnown RBP1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 MED11Q9P086 117 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 NUBP2Q9Y5Y2 271 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 KDM6AO15550 1401 aaPredicted RBP1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 ARHGEF11O15085 1522 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 NUP210LQ5VU65 1888 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 KIAA1549Q9HCM3 1950 aa1.28□□□□□ -2.2
RNU2-28P-201ENST00000410457 IGKV2D-26A0A0A0MRZ7 120 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 A0A1B0GV72 72 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 B4DSR2 109 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 CCL16O15467 120 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 PFDN1O60925 122 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 IGLV1-51P01701 117 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 HBBP68871 147 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 TFAMQ00059 246 aaKnown RBP1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 CDK6Q00534 326 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 MSMO1Q15800 293 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 OR4K15Q8NH41 348 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 DYDC1Q8WWB3 177 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 CHCHD1Q96BP2 118 aaKnown RBP1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 CARD19Q96LW7 228 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 ASB4Q9Y574 426 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 UNC13CQ8NB66 2214 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 DLG5Q8TDM6 1919 aa1.27□□□□□ -2.21
RNU2-28P-201ENST00000410457 ZCCHC11Q5TAX3 1644 aaKnown RBP1.26□□□□□ -2.21
RNU2-28P-201ENST00000410457 TRPM1Q7Z4N2 1603 aa1.26□□□□□ -2.21
RNU2-28P-201ENST00000410457 TRBV6-7A0A0A0MS04 114 aa1.26□□□□□ -2.21
RNU2-28P-201ENST00000410457 TRAV10A0A0B4J240 114 aa1.26□□□□□ -2.21
RNU2-28P-201ENST00000410457 ODAMA1E959 279 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms