RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SLC38A11Q08AI6 406 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 MZT2BQ6NZ67 158 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 TEPPQ6URK8 271 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 PATE2Q6UY27 113 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 ZNF709Q8N972 641 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 CLUHP3Q96NS8 147 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 GPR82Q96P67 336 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 UHRF2Q96PU4 802 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 HRH4Q9H3N8 390 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 MGAT4CQ9UBM8 478 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
LSM5-204ENST00000409909 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
LSM5-204ENST00000409909 VPS13DQ5THJ4 4388 aa12.77□□□□□ -0.36
LSM5-204ENST00000409909 TRAV8-2A0A0B4J237 113 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 A0A0J9YX75 114 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 OR5G3P0C626 314 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 IL15RAQ13261 267 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 FAM78BQ5VT40 261 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 SAMD13Q5VXD3 122 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 IGFL4Q6B9Z1 124 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 OR4B1Q8NGF8 309 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 C2orf50Q96LR7 162 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 GGACTQ9BVM4 153 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 RPRMQ9NS64 109 aa12.77□□□□□ -0.37
LSM5-204ENST00000409909 L7N2F9 121 aa12.76□□□□□ -0.37
LSM5-204ENST00000409909 S100A7P31151 101 aa12.76□□□□□ -0.37
LSM5-204ENST00000409909 RAP2BP61225 183 aa12.76□□□□□ -0.37
LSM5-204ENST00000409909 VAMP2P63027 116 aa12.76□□□□□ -0.37
LSM5-204ENST00000409909 IFITM3Q01628 133 aa12.76□□□□□ -0.37
LSM5-204ENST00000409909 SPATA31B1PQ5VZV4 182 aa12.76□□□□□ -0.37
LSM5-204ENST00000409909 ZNF705AQ6ZN79 300 aaPredicted RBP12.76□□□□□ -0.37
LSM5-204ENST00000409909 ARL6Q9H0F7 186 aa12.76□□□□□ -0.37
LSM5-204ENST00000409909 SLC35B3Q9H1N7 401 aa12.76□□□□□ -0.37
LSM5-204ENST00000409909 AGPAT2O15120 278 aa12.75□□□□□ -0.37
LSM5-204ENST00000409909 UPK1BO75841 260 aa12.75□□□□□ -0.37
LSM5-204ENST00000409909 HLA-DMBP28068 263 aa12.75□□□□□ -0.37
LSM5-204ENST00000409909 PSG9Q00887 426 aa12.75□□□□□ -0.37
LSM5-204ENST00000409909 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
LSM5-204ENST00000409909 RNF182Q8N6D2 247 aa12.75□□□□□ -0.37
LSM5-204ENST00000409909 CELA1Q9UNI1 258 aa12.75□□□□□ -0.37
LSM5-204ENST00000409909 FAM24AA6NFZ4 105 aa12.74□□□□□ -0.37
LSM5-204ENST00000409909 ZNF705FA8MVS1 300 aaPredicted RBP12.74□□□□□ -0.37
LSM5-204ENST00000409909 CST7O76096 145 aa12.74□□□□□ -0.37
LSM5-204ENST00000409909 ZNF705DP0CH99 300 aaPredicted RBP12.74□□□□□ -0.37
LSM5-204ENST00000409909 ZNF705BP0CI00 300 aaPredicted RBP12.74□□□□□ -0.37
LSM5-204ENST00000409909 BCAP31P51572 246 aa12.74□□□□□ -0.37
LSM5-204ENST00000409909 CAV2P51636 162 aa12.74□□□□□ -0.37
LSM5-204ENST00000409909 C2CD4CQ8TF44 421 aa12.74□□□□□ -0.37
LSM5-204ENST00000409909 MGST2Q99735 147 aa12.74□□□□□ -0.37
LSM5-204ENST00000409909 PTTG2Q9NZH5 202 aa12.74□□□□□ -0.37
LSM5-204ENST00000409909 A8MTW9 85 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 GOSR2O14653 212 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 RPL7P18124 248 aaKnown RBP12.73□□□□□ -0.37
LSM5-204ENST00000409909 FGL1Q08830 312 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 RAB32Q13637 225 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 AMTNQ6UX39 209 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 Q6ZTC4 211 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 ZNF546Q86UE3 836 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 NEU1Q99519 415 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 ARV1Q9H2C2 271 aa12.73□□□□□ -0.37
LSM5-204ENST00000409909 BIRC6Q9NR09 4857 aa12.72□□□□□ -0.37
LSM5-204ENST00000409909 IGHV3OR16-12A0A075B7B8 117 aa12.72□□□□□ -0.37
LSM5-204ENST00000409909 MRPS12O15235 138 aaKnown RBP12.72□□□□□ -0.37
LSM5-204ENST00000409909 S100A10P60903 97 aa12.72□□□□□ -0.37
LSM5-204ENST00000409909 C12orf74Q32Q52 190 aa12.72□□□□□ -0.37
LSM5-204ENST00000409909 PXDC1Q5TGL8 231 aa12.72□□□□□ -0.37
LSM5-204ENST00000409909 ZNF767PQ75MW2 155 aa12.72□□□□□ -0.37
LSM5-204ENST00000409909 TMEM37Q8WXS4 190 aa12.72□□□□□ -0.37
LSM5-204ENST00000409909 A0A087X0K7 114 aa12.71□□□□□ -0.37
LSM5-204ENST00000409909 IGSF23A1L1A6 192 aa12.71□□□□□ -0.37
LSM5-204ENST00000409909 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
LSM5-204ENST00000409909 LINC00305Q7Z4B0 112 aa12.71□□□□□ -0.37
LSM5-204ENST00000409909 NRARPQ7Z6K4 114 aa12.71□□□□□ -0.37
LSM5-204ENST00000409909 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.37
LSM5-204ENST00000409909 ENKURQ8TC29 256 aa12.71□□□□□ -0.37
LSM5-204ENST00000409909 LYRM2Q9NU23 88 aaPredicted RBP12.71□□□□□ -0.37
LSM5-204ENST00000409909 SMIM9A6NGZ8 99 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 IGLL5B9A064 214 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 PVALBP20472 110 aaPredicted RBP12.7□□□□□ -0.38
LSM5-204ENST00000409909 SULT1A1P50225 295 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 CNN1P51911 297 aaKnown RBP12.7□□□□□ -0.38
LSM5-204ENST00000409909 VWC2Q2TAL6 325 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 MORN5Q5VZ52 161 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 LGALS9CQ6DKI2 356 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 S100A7AQ86SG5 101 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 TMEM252Q8N6L7 170 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 APLNQ9ULZ1 77 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 FRAS1Q86XX4 4008 aa12.7□□□□□ -0.38
LSM5-204ENST00000409909 SIX6O95475 246 aa12.69□□□□□ -0.38
LSM5-204ENST00000409909 CXCL3P19876 107 aa12.69□□□□□ -0.38
LSM5-204ENST00000409909 CAMLGP49069 296 aa12.69□□□□□ -0.38
LSM5-204ENST00000409909 RPP25LQ8N5L8 163 aaKnown RBP12.69□□□□□ -0.38
LSM5-204ENST00000409909 ZNF738Q8NE65 137 aa12.69□□□□□ -0.38
LSM5-204ENST00000409909 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
LSM5-204ENST00000409909 UQCC1Q9NVA1 299 aa12.69□□□□□ -0.38
LSM5-204ENST00000409909 TRAV10A0A0B4J240 114 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 COX7A2P2O60397 106 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
LSM5-204ENST00000409909 SNRPCP09234 159 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms