RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ASCL2Q99929 193 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 WNT10AQ9GZT5 417 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 RALYQ9UKM9 306 aaKnown RBP7.78□□□□□ -1.16
MSH2-202ENST00000406134 C20orf202A1L168 122 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 FAM181BA6NEQ2 426 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 SLC25A5P05141 298 aaKnown RBP7.77□□□□□ -1.17
MSH2-202ENST00000406134 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 SLC25A39Q9BZJ4 359 aaPredicted RBP7.77□□□□□ -1.17
MSH2-202ENST00000406134 RPP21Q9H633 154 aaKnown RBP7.77□□□□□ -1.17
MSH2-202ENST00000406134 LPAR2Q9HBW0 351 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 TMEM14CQ9P0S9 112 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 NDUFB8O95169 186 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 TFPI2P48307 235 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 CT83Q5H943 113 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 SRSF12Q8WXF0 261 aaKnown RBP7.77□□□□□ -1.17
MSH2-202ENST00000406134 FMC1Q96HJ9 113 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 CELSR2Q9HCU4 2923 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 LY6HO94772 140 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 CRIP1P50238 77 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 RBPJQ06330 500 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 SPATA45Q537H7 98 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 LINC00173Q6ZV60 143 aa7.77□□□□□ -1.17
MSH2-202ENST00000406134 CIARTQ8N365 385 aaPredicted RBP7.77□□□□□ -1.17
MSH2-202ENST00000406134 M0QZK8 103 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 RBP4P02753 201 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 SSX8Q7RTT4 187 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 C5orf17Q8NAS9 161 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 OR4B1Q8NGF8 309 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 LINC01560Q8TB33 94 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 B9A039 149 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 HIST1H1EP10412 219 aaKnown RBP7.76□□□□□ -1.17
MSH2-202ENST00000406134 CDKN1BP46527 198 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 PMCHL1Q16048 86 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 ATOH7Q8N100 152 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 CLUHP3Q96NS8 147 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 DYNLRB1Q9NP97 96 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 SIGLEC15Q6ZMC9 328 aa7.76□□□□□ -1.17
MSH2-202ENST00000406134 ZNF331Q9NQX6 463 aaPredicted RBP7.76□□□□□ -1.17
MSH2-202ENST00000406134 ABCA1O95477 2261 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 TRBV6-1A0A0K0K1D8 114 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 ODF3BA8MYP8 253 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 H3BRN7 92 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 CRXO43186 299 aaPredicted RBP7.75□□□□□ -1.17
MSH2-202ENST00000406134 CFAP161Q6P656 301 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 STXBP6Q8NFX7 210 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 ZC2HC1AQ96GY0 325 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 INSIG2Q9Y5U4 225 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 CRYBG3Q68DQ2 2970 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 LOC102724200A0A096LPH7 203 aaPredicted RBP7.75□□□□□ -1.17
MSH2-202ENST00000406134 K7ENP7 123 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 NDUFA3O95167 84 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 COX7A1P24310 79 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 DYNAPQ8N1N2 210 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 OR4F17Q8NGA8 305 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 PTPRQQ9UMZ3 2332 aa7.75□□□□□ -1.17
MSH2-202ENST00000406134 IGHV1-24A0A0C4DH33 117 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 TMEM238C9JI98 176 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 TIMM23O14925 209 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 CAMPP49913 170 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 FOXA3P55318 350 aaPredicted RBP7.74□□□□□ -1.17
MSH2-202ENST00000406134 GATD1Q8NB37 220 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 VKORC1Q9BQB6 163 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 GFRA4Q9GZZ7 299 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 CLEC5AQ9NY25 188 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 MED13LQ71F56 2210 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 PPIAL4CA0A0B4J2A2 164 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 WI2-2373I1.2A0A1W2PRP0 233 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 PPIAL4GP0DN37 164 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 UBE2G1P62253 170 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 HBBP68871 147 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 NDPQ00604 133 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 FBXL19-AS1Q494R0 122 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 ZNF672Q499Z4 452 aaPredicted RBP7.74□□□□□ -1.17
MSH2-202ENST00000406134 STPG4Q8N801 248 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 ZNF491Q8N8L2 437 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 OTORQ9NRC9 128 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 TRBV19A0A075B6N1 114 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 CA7P43166 264 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 KLRD1Q13241 179 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 C11orf71Q6IPW1 123 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 OR11H6Q8NGC7 330 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 PGLYRP4Q96LB8 373 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 FANCD2OSQ96PS1 177 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 SHANK2-AS3Q9BTD1 123 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 HIGD1AQ9Y241 93 aa7.74□□□□□ -1.17
MSH2-202ENST00000406134 LYZP61626 148 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 RPL19P84098 196 aaKnown RBP7.73□□□□□ -1.17
MSH2-202ENST00000406134 MUC15Q8N387 334 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 NPBQ8NG41 125 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 OR2D3Q8NGH3 330 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 NTF3P20783 257 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 KLF17Q5JT82 389 aaPredicted RBP7.73□□□□□ -1.17
MSH2-202ENST00000406134 CD3EP07766 207 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 IGLL1P15814 213 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 BMI1P35226 326 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 AJUBAQ96IF1 538 aa7.73□□□□□ -1.17
MSH2-202ENST00000406134 COL12A1Q99715 3063 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 HAX1O00165 279 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms