RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PLGLB1Q02325 96 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 FOXF1Q12946 379 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 CST6Q15828 149 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST2H2BEQ16778 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 LGALSLQ3ZCW2 172 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 LAIR2Q6ISS4 152 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 SCGB1D4Q6XE38 83 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 SSX8Q7RTT4 187 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 RPS19BP1Q86WX3 136 aaKnown RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 PRR15Q8IV56 129 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 ATOH7Q8N100 152 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 LINC00311Q8N616 119 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR4K13Q8NH42 304 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 SGMS2Q8NHU3 365 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BHQ93079 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BNQ99877 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BMQ99879 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 B9D2Q9BPU9 175 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 DPY30Q9C005 99 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 AICDAQ9GZX7 198 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 C11orf68Q9H3H3 251 aaKnown RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 KLK5Q9Y337 293 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 MRPS16Q9Y3D3 137 aaKnown RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 CROCC2H7BZ55 1655 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 DIP2AQ14689 1571 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 GOLGA3Q08378 1498 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 DCCP43146 1447 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 SCN10AQ9Y5Y9 1956 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 KIF26AQ9ULI4 1882 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 MAP2P11137 1827 aaKnown RBP2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 TRBV20-1A0A075B6N2 111 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 OOSP1A8MZH6 123 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 RER1O15258 196 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 LTAP01374 205 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 TNFP01375 233 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 CTSEP14091 401 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 GADD45AP24522 165 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 CRYBB3P26998 211 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 PSMB8P28062 276 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF93P35789 620 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 YPEL3P61236 119 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 DAD1P61803 113 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 RTL8BQ17RB0 113 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 AADACL3Q5VUY0 350 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 EIF5AL1Q6IS14 154 aaKnown RBP2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 Q6Q795 121 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 HEPN1Q6WQI6 88 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 HMGN2P46Q86SG4 172 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR5AK2Q8NH90 309 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 PSMF1Q92530 271 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 TMEM70Q9BUB7 260 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 SNRNP25Q9BV90 132 aaKnown RBP2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 RTL8AQ9BWD3 113 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 TMEM191AQ9H0A3 160 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 BANF2Q9H503 90 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 LTN1O94822 1766 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 IQGAP3Q86VI3 1631 aa2.78□□□□□ -1.96
HMGB1P13-201ENST00000406019 ARHGAP5Q13017 1502 aa2.78□□□□□ -1.97
HMGB1P13-201ENST00000406019 DUOX2Q9NRD8 1548 aa2.78□□□□□ -1.97
HMGB1P13-201ENST00000406019 NUP210LQ5VU65 1888 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 RGS12O14924 1447 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 SIPA1L1O43166 1804 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 PARP14Q460N5 1801 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 KIF20BQ96Q89 1820 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 DSPPQ9NZW4 1301 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1OR2-108A0A075B7D4 117 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1D-43A0A0B4J1Z2 117 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRAV41A0A0B4J266 112 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 GRIFINA4D1Z8 144 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 ARRDC5A6NEK1 342 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF727A8MUV8 499 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 K7ERS5 55 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 M0R381 172 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 PIRO00625 290 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 GEMIN2O14893 280 aaKnown RBP2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 PITX3O75364 302 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 LYZL6O75951 148 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRGC2P03986 189 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV3-11P04433 115 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 SLC25A6P12236 298 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 SRP14P37108 136 aaKnown RBP2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 HINT1P49773 126 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 LINC00313P59037 77 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 HES1Q14469 280 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 MSMO1Q15800 293 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 MRPL54Q6P161 138 aaKnown RBP2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 RPP25LQ8N5L8 163 aaKnown RBP2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 OTOSQ8NHW6 89 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF721Q8TF20 911 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 LSM10Q969L4 123 aaKnown RBP2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 NMNAT3Q96T66 252 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 SEC11CQ9BY50 192 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF492Q9P255 531 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 UQCR10Q9UDW1 63 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 TPRKBQ9Y3C4 175 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 GLI3P10071 1580 aa2.77□□□□□ -1.97
HMGB1P13-201ENST00000406019 NRKQ7Z2Y5 1582 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms