RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 TRAV1-1A0A0B4J248 108 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 IGHV7-4-1A0A0J9YVY3 117 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 TMEM213A2RRL7 107 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 TM4SF20Q53R12 229 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 CLLU1Q5K131 121 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 C1orf194Q5T5A4 169 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 LCN15Q6UWW0 184 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 STXBP6Q8NFX7 210 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 SFT2D1Q8WV19 159 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 GRAMD2BQ96HH9 432 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 TMEM231Q9H6L2 316 aa16.74■□□□□ 0.27
EPCAM-202ENST00000405271 BUB3O43684 328 aa16.73■□□□□ 0.27
EPCAM-202ENST00000405271 CXorf1O96002 111 aa16.73■□□□□ 0.27
EPCAM-202ENST00000405271 PF4P02776 101 aa16.73■□□□□ 0.27
EPCAM-202ENST00000405271 OR9G4Q8NGQ1 327 aa16.73■□□□□ 0.27
EPCAM-202ENST00000405271 MARC2Q969Z3 335 aa16.73■□□□□ 0.27
EPCAM-202ENST00000405271 FAM167A-AS1Q96KT0 104 aa16.73■□□□□ 0.27
EPCAM-202ENST00000405271 HMGB3O15347 200 aaKnown RBP16.72■□□□□ 0.27
EPCAM-202ENST00000405271 LYPD6BQ8NI32 183 aa16.72■□□□□ 0.27
EPCAM-202ENST00000405271 GPR82Q96P67 336 aa16.72■□□□□ 0.27
EPCAM-202ENST00000405271 TRAV5A0A0B4J249 113 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 C2orf70A6NJV1 201 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 OVOL1O14753 267 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 OR7C2O60412 319 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 ARL14EPLP0DKL9 152 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 RPL7P18124 248 aaKnown RBP16.71■□□□□ 0.27
EPCAM-202ENST00000405271 LEMD1Q68G75 181 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 BPIFA4PQ86YQ2 179 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 PCNPQ8WW12 178 aaKnown RBP16.71■□□□□ 0.27
EPCAM-202ENST00000405271 TMEM14CQ9P0S9 112 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 SMPXQ9UHP9 88 aa16.71■□□□□ 0.27
EPCAM-202ENST00000405271 EIF3GO75821 320 aaKnown RBP eCLIP16.7■□□□□ 0.26
EPCAM-202ENST00000405271 APOHP02749 345 aaPredicted RBP16.7■□□□□ 0.26
EPCAM-202ENST00000405271 C16orf54Q6UWD8 224 aa16.7■□□□□ 0.26
EPCAM-202ENST00000405271 IL34Q6ZMJ4 242 aa16.7■□□□□ 0.26
EPCAM-202ENST00000405271 OR8I2Q8N0Y5 310 aa16.7■□□□□ 0.26
EPCAM-202ENST00000405271 M0QZ24 198 aa16.7■□□□□ 0.26
EPCAM-202ENST00000405271 GP9P14770 177 aa16.7■□□□□ 0.26
EPCAM-202ENST00000405271 FGF8P55075 233 aaPredicted RBP16.7■□□□□ 0.26
EPCAM-202ENST00000405271 PAXXQ9BUH6 204 aa16.7■□□□□ 0.26
EPCAM-202ENST00000405271 ELOVL1Q9BW60 279 aa16.7■□□□□ 0.26
EPCAM-202ENST00000405271 OR51M1Q9H341 326 aa16.7■□□□□ 0.26
EPCAM-202ENST00000405271 IGHV3-49A0A0A0MS15 119 aa16.69■□□□□ 0.26
EPCAM-202ENST00000405271 CHEK1O14757 476 aa16.69■□□□□ 0.26
EPCAM-202ENST00000405271 CBLN1P23435 193 aa16.69■□□□□ 0.26
EPCAM-202ENST00000405271 PSMB3P49720 205 aa16.69■□□□□ 0.26
EPCAM-202ENST00000405271 GLMPQ8WWB7 406 aa16.69■□□□□ 0.26
EPCAM-202ENST00000405271 ZNF503Q96F45 646 aa16.69■□□□□ 0.26
EPCAM-202ENST00000405271 RHPN1-AS1Q9BWJ2 59 aa16.69■□□□□ 0.26
EPCAM-202ENST00000405271 HRH4Q9H3N8 390 aa16.69■□□□□ 0.26
EPCAM-202ENST00000405271 IGHV3OR16-13A0A075B7E8 117 aa16.68■□□□□ 0.26
EPCAM-202ENST00000405271 IGHV3-74A0A0B4J1X5 117 aa16.68■□□□□ 0.26
EPCAM-202ENST00000405271 GCHFRP30047 84 aa16.68■□□□□ 0.26
EPCAM-202ENST00000405271 UBE2L3P68036 154 aaKnown RBP16.68■□□□□ 0.26
EPCAM-202ENST00000405271 TMEM167BQ9NRX6 74 aa16.68■□□□□ 0.26
EPCAM-202ENST00000405271 IGHV3-66A0A0C4DH42 116 aa16.67■□□□□ 0.26
EPCAM-202ENST00000405271 MRPS12O15235 138 aaKnown RBP16.67■□□□□ 0.26
EPCAM-202ENST00000405271 FOLR2P14207 255 aa16.67■□□□□ 0.26
EPCAM-202ENST00000405271 GALR1P47211 349 aa16.67■□□□□ 0.26
EPCAM-202ENST00000405271 IQCF2Q8IXL9 164 aa16.67■□□□□ 0.26
EPCAM-202ENST00000405271 LINC00482Q8N8I6 264 aa16.67■□□□□ 0.26
EPCAM-202ENST00000405271 A0A1B0GV50 99 aa16.66■□□□□ 0.26
EPCAM-202ENST00000405271 CSN3P07498 182 aa16.66■□□□□ 0.26
EPCAM-202ENST00000405271 PYYP10082 97 aa16.66■□□□□ 0.26
EPCAM-202ENST00000405271 EDN2P20800 178 aa16.66■□□□□ 0.26
EPCAM-202ENST00000405271 PPT1P50897 306 aa16.66■□□□□ 0.26
EPCAM-202ENST00000405271 SIGLEC15Q6ZMC9 328 aa16.66■□□□□ 0.26
EPCAM-202ENST00000405271 FXYD5Q96DB9 178 aa16.66■□□□□ 0.26
EPCAM-202ENST00000405271 SIGLEC8Q9NYZ4 499 aa16.66■□□□□ 0.26
EPCAM-202ENST00000405271 OR10J4P0C629 311 aa16.65■□□□□ 0.26
EPCAM-202ENST00000405271 IGLC2P0DOY2 106 aa16.65■□□□□ 0.26
EPCAM-202ENST00000405271 HIST1H1EP10412 219 aaKnown RBP16.65■□□□□ 0.26
EPCAM-202ENST00000405271 SUN5Q8TC36 379 aa16.65■□□□□ 0.26
EPCAM-202ENST00000405271 MEGF8Q7Z7M0 2845 aa16.65■□□□□ 0.26
EPCAM-202ENST00000405271 A0A087X0K7 114 aa16.65■□□□□ 0.26
EPCAM-202ENST00000405271 HELTA6NFD8 242 aa16.65■□□□□ 0.26
EPCAM-202ENST00000405271 CD5P06127 495 aa16.65■□□□□ 0.26
EPCAM-202ENST00000405271 ATF4P18848 351 aaPredicted RBP16.65■□□□□ 0.26
EPCAM-202ENST00000405271 PMS2P11Q13670 270 aa16.64■□□□□ 0.25
EPCAM-202ENST00000405271 GUK1Q16774 197 aa16.64■□□□□ 0.25
EPCAM-202ENST00000405271 TMPRSS5Q9H3S3 457 aa16.64■□□□□ 0.25
EPCAM-202ENST00000405271 MANBALQ9NQG1 85 aa16.64■□□□□ 0.25
EPCAM-202ENST00000405271 IFNA1P01562 189 aa16.63■□□□□ 0.25
EPCAM-202ENST00000405271 MEOX2P50222 304 aa16.63■□□□□ 0.25
EPCAM-202ENST00000405271 CCL20P78556 96 aa16.63■□□□□ 0.25
EPCAM-202ENST00000405271 ADAMTSL5Q6ZMM2 481 aa16.63■□□□□ 0.25
EPCAM-202ENST00000405271 DYNLRB2Q8TF09 96 aa16.63■□□□□ 0.25
EPCAM-202ENST00000405271 ARL2-SNX15V9GYD0 113 aa16.63■□□□□ 0.25
EPCAM-202ENST00000405271 PDE6HQ13956 83 aa16.62■□□□□ 0.25
EPCAM-202ENST00000405271 MLXQ9UH92 298 aa16.62■□□□□ 0.25
EPCAM-202ENST00000405271 CMYA5Q8N3K9 4069 aa16.62■□□□□ 0.25
EPCAM-202ENST00000405271 NBEAP1P0C6P0 100 aa16.61■□□□□ 0.25
EPCAM-202ENST00000405271 TCF24Q7RTU0 167 aa16.61■□□□□ 0.25
EPCAM-202ENST00000405271 MED9Q9NWA0 146 aa16.61■□□□□ 0.25
EPCAM-202ENST00000405271 ZNF586Q9NXT0 402 aa16.61■□□□□ 0.25
EPCAM-202ENST00000405271 SMAD5-AS1Q9Y6J3 95 aa16.61■□□□□ 0.25
EPCAM-202ENST00000405271 ZNF785A8K8V0 405 aa16.6■□□□□ 0.25
EPCAM-202ENST00000405271 H3BQ15 152 aa16.6■□□□□ 0.25
EPCAM-202ENST00000405271 TAGLN2P37802 199 aaKnown RBP16.6■□□□□ 0.25
EPCAM-202ENST00000405271 FAM90A2PQ658T7 463 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms