RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 LINC00479Q96M42 142 aa12.41□□□□□ -0.42
UBXN2B-201ENST00000399598 PGPEP1Q9NXJ5 209 aa12.41□□□□□ -0.42
UBXN2B-201ENST00000399598 C9JQL5 133 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 RIPPLY3P57055 190 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 GUSBP1Q15486 140 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 SAMD5Q5TGI4 173 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 BRD3OSQ6XYD6 125 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 SIGLEC9Q9Y336 463 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 Q6ZS49 121 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 TTC28Q96AY4 2481 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 LYL1P12980 280 aa12.4□□□□□ -0.42
UBXN2B-201ENST00000399598 GBF1Q92538 1859 aa12.4□□□□□ -0.43
UBXN2B-201ENST00000399598 EFNA4P52798 201 aa12.4□□□□□ -0.43
UBXN2B-201ENST00000399598 BCL6BQ8N143 479 aaPredicted RBP12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 LSM4Q9Y4Z0 139 aaKnown RBP12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 IGKV1-6A0A0C4DH72 117 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 A0A0G2JNJ9 132 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 Q9UFV3 132 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 IGHV3-73A0A0B4J1V6 119 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 RNASE2P10153 161 aaKnown RBP12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 ZNF124Q15973 351 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 SPSB3Q6PJ21 355 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 OR9G4Q8NGQ1 327 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 MCRIP2Q9BUT9 160 aaKnown RBP12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 SMPXQ9UHP9 88 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 RASL11AQ6T310 242 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 LYPD2Q6UXB3 125 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 RNF5Q99942 180 aa12.39□□□□□ -0.43
UBXN2B-201ENST00000399598 H3BUX3 64 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 SH2D1AO60880 128 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 TMEM249Q2WGJ8 235 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 ASCL4Q6XD76 172 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 LY96Q9Y6Y9 160 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 A0A087X0K7 114 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 MPV17L2Q567V2 206 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 FOXL2NBQ6ZUU3 175 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 SLC25A2Q9BXI2 301 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 ZNF474Q6S9Z5 364 aaPredicted RBP12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 ZNRD1Q9P1U0 126 aa12.38□□□□□ -0.43
UBXN2B-201ENST00000399598 A8MWV9 139 aa12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 MST1LQ2TV78 715 aa12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 DOCK11Q5JSL3 2073 aa12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 MBD3L4A6NDZ8 208 aaPredicted RBP12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 MBD3L3A6NE82 208 aaPredicted RBP12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 MBD3L5A6NJ08 208 aaPredicted RBP12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 Q5PR19 223 aa12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 MINOS1Q5TGZ0 78 aa12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 MBD3L2Q8NHZ7 208 aaPredicted RBP12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 MINOS1-NBL1R4GNA1 71 aa12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 FAM208BQ5VWN6 2430 aa12.37□□□□□ -0.43
UBXN2B-201ENST00000399598 OOSP1A8MZH6 123 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 PSG3Q16557 428 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 RPRMLQ8N4K4 120 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 C14orf178Q8N769 122 aaPredicted RBP12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 ERG28Q9UKR5 140 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 SMKR1H3BMG3 65 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 FCN3O75636 299 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 AMN1Q8IY45 258 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 NPC2P61916 151 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 C9orf139Q6ZV77 190 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 ZNF329Q86UD4 541 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 ZNF664Q8N3J9 261 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 NOTCH2Q04721 2471 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 ADARB2-AS1A8MUL3 147 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 SYS1-DBNDD2H3BUS1 97 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 WISP1O95388 367 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 RSPO3Q9BXY4 272 aaPredicted RBP12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 ANK1P16157 1881 aa12.36□□□□□ -0.43
UBXN2B-201ENST00000399598 COL8A2P25067 703 aa12.35□□□□□ -0.43
UBXN2B-201ENST00000399598 PLCE1Q9P212 2302 aa12.35□□□□□ -0.43
UBXN2B-201ENST00000399598 DLEU1O43261 78 aa12.35□□□□□ -0.43
UBXN2B-201ENST00000399598 SLC25A20O43772 301 aa12.35□□□□□ -0.43
UBXN2B-201ENST00000399598 RCHY1Q96PM5 261 aa12.35□□□□□ -0.43
UBXN2B-201ENST00000399598 LINC00158P58513 81 aa12.35□□□□□ -0.43
UBXN2B-201ENST00000399598 ZC2HC1BQ5TFG8 222 aa12.35□□□□□ -0.43
UBXN2B-201ENST00000399598 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 ARTNQ5T4W7 220 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 SIGMAR1Q99720 223 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 IGHG3P01860 377 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 TMEM158Q8WZ71 300 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 MRPL27Q9P0M9 148 aaKnown RBP12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 LINC01549A6NIU2 74 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 M0R2P5 195 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 NSUN5P1Q3KNT7 163 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 DPH3P1Q9H4G8 78 aa12.34□□□□□ -0.43
UBXN2B-201ENST00000399598 A0A1W2PPI3 338 aa12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 TCF20Q9UGU0 1960 aaKnown RBP12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 C1orf147Q96MC9 270 aaPredicted RBP12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 A0A1B0GUS0 222 aa12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 TOMM40O96008 361 aa12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 MORN3Q6PF18 240 aaPredicted RBP12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 Q6ZS92 163 aa12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
UBXN2B-201ENST00000399598 LYPD1Q8N2G4 141 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms