RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 COL25A1Q9BXS0 654 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 RAXQ9Y2V3 346 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 HSBP1O75506 76 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 C3orf79P0CE67 100 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 RNF224P0DH78 156 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 IGLC2P0DOY2 106 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 FAM19A2Q8N3H0 131 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 TMEM75Q8N9X5 138 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 K7EQM0 130 aa18.22■□□□□ 0.51
RABGGTA-202ENST00000399409 NTF3P20783 257 aa18.22■□□□□ 0.51
RABGGTA-202ENST00000399409 HES1Q14469 280 aa18.22■□□□□ 0.51
RABGGTA-202ENST00000399409 OR2D3Q8NGH3 330 aa18.22■□□□□ 0.51
RABGGTA-202ENST00000399409 ZFP30Q9Y2G7 519 aa18.22■□□□□ 0.51
RABGGTA-202ENST00000399409 TLN1Q9Y490 2541 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-202ENST00000399409 A6NNC1 897 aa18.21■□□□□ 0.51
RABGGTA-202ENST00000399409 HLA-DRB1P01911 266 aa18.21■□□□□ 0.51
RABGGTA-202ENST00000399409 COL8A1P27658 744 aa18.21■□□□□ 0.51
RABGGTA-202ENST00000399409 C16orf54Q6UWD8 224 aa18.21■□□□□ 0.51
RABGGTA-202ENST00000399409 ZNF562Q6V9R5 426 aa18.21■□□□□ 0.51
RABGGTA-202ENST00000399409 PRNTQ86SH4 94 aa18.21■□□□□ 0.51
RABGGTA-202ENST00000399409 PGLYRP4Q96LB8 373 aa18.21■□□□□ 0.51
RABGGTA-202ENST00000399409 MFAP4P55083 255 aa18.21■□□□□ 0.51
RABGGTA-202ENST00000399409 IL4P05112 153 aa18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 ANKHD1Q8IWZ3 2542 aaKnown RBP18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 IGLV11-55A0A075B6I3 123 aa18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 TRAV8-1A0A0A6YYK1 113 aa18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 GNG7O60262 68 aa18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 SIGLEC15Q6ZMC9 328 aa18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 CIARTQ8N365 385 aaPredicted RBP18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 ARPC1AQ92747 370 aa18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 SPTBN2O15020 2390 aa18.2■□□□□ 0.5
RABGGTA-202ENST00000399409 MINOS1Q5TGZ0 78 aa18.19■□□□□ 0.5
RABGGTA-202ENST00000399409 DTX2Q86UW9 622 aa18.19■□□□□ 0.5
RABGGTA-202ENST00000399409 TTC9CQ8N5M4 171 aa18.19■□□□□ 0.5
RABGGTA-202ENST00000399409 MINOS1-NBL1R4GNA1 71 aa18.19■□□□□ 0.5
RABGGTA-202ENST00000399409 MRPS12O15235 138 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-202ENST00000399409 CTRLP40313 264 aa18.19■□□□□ 0.5
RABGGTA-202ENST00000399409 ADGRG4Q8IZF6 3080 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 M0R2Z0 102 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 FOXA3P55318 350 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 RNASEKQ6P5S7 137 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 FANCD2OSQ96PS1 177 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 DMXL2Q8TDJ6 3036 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 HAX1O00165 279 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 CD24P25063 80 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 PDE6HQ13956 83 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 PMCHL1Q16048 86 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 VMO1Q7Z5L0 202 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 Q8N6K4 173 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 ZNF414Q96IQ9 312 aa18.18■□□□□ 0.5
RABGGTA-202ENST00000399409 SMG1Q96Q15 3661 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-202ENST00000399409 FAM181BA6NEQ2 426 aa18.17■□□□□ 0.5
RABGGTA-202ENST00000399409 FCGR2BP31994 310 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-202ENST00000399409 EBI3Q14213 229 aa18.17■□□□□ 0.5
RABGGTA-202ENST00000399409 SPATA45Q537H7 98 aa18.17■□□□□ 0.5
RABGGTA-202ENST00000399409 KLF17Q5JT82 389 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 THYN1Q9P016 225 aa18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 A0A1W2PRD5 423 aa18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 A0A1W2PRF3 423 aa18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 A0A1W2PRM7 423 aa18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 PSG3Q16557 428 aa18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 IGFBPL1Q8WX77 278 aa18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 C17orf77Q96MU5 243 aa18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 PSG8Q9UQ74 426 aa18.16■□□□□ 0.5
RABGGTA-202ENST00000399409 CHEK1O14757 476 aa18.15■□□□□ 0.5
RABGGTA-202ENST00000399409 TCAPO15273 167 aa18.15■□□□□ 0.5
RABGGTA-202ENST00000399409 SCGB2A1O75556 95 aa18.15■□□□□ 0.5
RABGGTA-202ENST00000399409 TOX4O94842 621 aa18.15■□□□□ 0.5
RABGGTA-202ENST00000399409 CHCHD1Q96BP2 118 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-202ENST00000399409 ZC2HC1AQ96GY0 325 aa18.15■□□□□ 0.5
RABGGTA-202ENST00000399409 NDFIP1Q9BT67 221 aa18.15■□□□□ 0.5
RABGGTA-202ENST00000399409 KALRNO60229 2985 aa18.14■□□□□ 0.5
RABGGTA-202ENST00000399409 NCBP2LA6PVI3 153 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 CYB5R2Q6BCY4 276 aa18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 C21orf62Q9NYP8 219 aa18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 SERTM2A0A1B0GWG4 89 aa18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 BTF3P20290 206 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 FBLN7Q53RD9 439 aa18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 Q56UQ5 140 aa18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 DMRTA1Q5VZB9 504 aa18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 KLHDC1Q8N7A1 406 aa18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 AAMDCQ9H7C9 122 aa18.14■□□□□ 0.49
RABGGTA-202ENST00000399409 CEP295Q9C0D2 2601 aa18.13■□□□□ 0.49
RABGGTA-202ENST00000399409 LOC102724200A0A096LPH7 203 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-202ENST00000399409 APOHP02749 345 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-202ENST00000399409 UQCR10Q9UDW1 63 aa18.13■□□□□ 0.49
RABGGTA-202ENST00000399409 DYNAPQ8N1N2 210 aa18.12■□□□□ 0.49
RABGGTA-202ENST00000399409 A0A1B0GW15 77 aa18.12■□□□□ 0.49
RABGGTA-202ENST00000399409 ZNF785A8K8V0 405 aa18.12■□□□□ 0.49
RABGGTA-202ENST00000399409 RIGQ13278 110 aa18.12■□□□□ 0.49
RABGGTA-202ENST00000399409 ARL6IP6Q8N6S5 226 aa18.12■□□□□ 0.49
RABGGTA-202ENST00000399409 URB1-AS1Q96HZ7 61 aa18.12■□□□□ 0.49
RABGGTA-202ENST00000399409 F8W735 103 aaPredicted RBP18.11■□□□□ 0.49
RABGGTA-202ENST00000399409 TMEM11P17152 192 aa18.11■□□□□ 0.49
RABGGTA-202ENST00000399409 NDPQ00604 133 aa18.11■□□□□ 0.49
RABGGTA-202ENST00000399409 PSG9Q00887 426 aa18.11■□□□□ 0.49
RABGGTA-202ENST00000399409 EBLN2Q6P2I7 272 aa18.11■□□□□ 0.49
RABGGTA-202ENST00000399409 S4R3C0 116 aa18.11■□□□□ 0.49
RABGGTA-202ENST00000399409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-202ENST00000399409 A0A1B0GUT8 65 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms