RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 OR1N2Q8NGR9 330 aa9.05□□□□□ -0.96
C4orf3-201ENST00000399075 OR8B2Q96RD0 313 aa9.05□□□□□ -0.96
C4orf3-201ENST00000399075 GFRA4Q9GZZ7 299 aa9.05□□□□□ -0.96
C4orf3-201ENST00000399075 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
C4orf3-201ENST00000399075 MALRD1Q5VYJ5 2156 aa9.05□□□□□ -0.96
C4orf3-201ENST00000399075 MAP1BP46821 2468 aaKnown RBP9.05□□□□□ -0.96
C4orf3-201ENST00000399075 ZFHX2Q9C0A1 2572 aaPredicted RBP9.04□□□□□ -0.96
C4orf3-201ENST00000399075 TRBV6-1A0A0K0K1D8 114 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 A0A1B0GV72 72 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 DIRC3C9JPN6 131 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 LYNX1G3V0Z9 82 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 LIPFP07098 398 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 LYNX1P0DP58 116 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 COX7A1P24310 79 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 KRTDAPP60985 99 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 SMAGPQ0VAQ4 97 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 ZNF672Q499Z4 452 aaPredicted RBP9.04□□□□□ -0.96
C4orf3-201ENST00000399075 NIT1Q86X76 327 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 FAM103A1Q9BTL3 118 aaKnown RBP9.04□□□□□ -0.96
C4orf3-201ENST00000399075 PCNX1Q96RV3 2341 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 FAM231BA6NCW3 169 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 A8MWL6 223 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 PLXNB1O43157 2135 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 PMCHP20382 165 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 DLX1P56177 255 aa9.04□□□□□ -0.96
C4orf3-201ENST00000399075 APC2O95996 2303 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 HOXB4P17483 251 aaPredicted RBP9.03□□□□□ -0.96
C4orf3-201ENST00000399075 LINC01560Q8TB33 94 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 SLC25A39Q9BZJ4 359 aaPredicted RBP9.03□□□□□ -0.96
C4orf3-201ENST00000399075 LAMA5O15230 3695 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 APELAP0DMC3 54 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 FOXC1Q12948 553 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 OR11H6Q8NGC7 330 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 RASL11BQ9BPW5 248 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 IGHV3-21A0A0B4J1V1 117 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 NPIPB6E9PJ23 425 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 P01737 135 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 LYZP61626 148 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 HBBP68871 147 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 ASPHD1Q5U4P2 390 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 CITED1Q99966 193 aa9.03□□□□□ -0.96
C4orf3-201ENST00000399075 VWC2LB2RUY7 222 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 IGKV1-17P01599 117 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 CLEC3BP05452 202 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 CTRLP40313 264 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 HERV-K104P63124 156 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 PLGLAQ15195 96 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 Q6ZN92 141 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 Q86TA4 180 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 WNT10AQ9GZT5 417 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 K7EIM0 57 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 TIMM23O14925 209 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 C3orf79P0CE67 100 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 FAM162BQ5T6X4 162 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 NPBQ8NG41 125 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 GTSF1LQ9H1H1 148 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 HIF1ANQ9NWT6 349 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 ONECUT1Q9UBC0 465 aa9.02□□□□□ -0.97
C4orf3-201ENST00000399075 NDUFA3O95167 84 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 HTR1DP28221 377 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 PRB3Q04118 309 aaPredicted RBP9.01□□□□□ -0.97
C4orf3-201ENST00000399075 LINC00322Q6ZN03 302 aaPredicted RBP9.01□□□□□ -0.97
C4orf3-201ENST00000399075 CFHR4Q92496 578 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 BORCS7Q96B45 105 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 SHANK2-AS3Q9BTD1 123 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 SCNM1Q9BWG6 230 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 DPM3Q9P2X0 92 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 POLEQ07864 2286 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 FAM90A27PA6NNH2 459 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 M0R1W7 72 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 NBR2O15453 112 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 LYPD1Q8N2G4 141 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 RAB1BQ9H0U4 201 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 ATMQ13315 3056 aa9.01□□□□□ -0.97
C4orf3-201ENST00000399075 TRAV30A0A087WSZ9 112 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 H3BRN7 92 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 CNIH1O95406 144 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 IGLV2-11P01706 119 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 RBPMS2Q6ZRY4 209 aaKnown RBP9□□□□□ -0.97
C4orf3-201ENST00000399075 GTSF1Q8WW33 167 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 DAZAP1Q96EP5 407 aaKnown RBP9□□□□□ -0.97
C4orf3-201ENST00000399075 SGK494Q96LW2 274 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 HSBP1O75506 76 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 CAMPP49913 170 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 HNRNPA3P51991 378 aaKnown RBP9□□□□□ -0.97
C4orf3-201ENST00000399075 TCF24Q7RTU0 167 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 TIMD4Q96H15 378 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 SMG1Q96Q15 3661 aaKnown RBP9□□□□□ -0.97
C4orf3-201ENST00000399075 TRBV19A0A075B6N1 114 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 GAGE12BA1L429 117 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 ODF3BA8MYP8 253 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 BPIFA4PQ86YQ2 179 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 FAM19A2Q8N3H0 131 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 ATP6V0BQ99437 205 aa9□□□□□ -0.97
C4orf3-201ENST00000399075 MUC6Q6W4X9 2439 aa8.99□□□□□ -0.97
C4orf3-201ENST00000399075 H3BTX0 84 aa8.99□□□□□ -0.97
C4orf3-201ENST00000399075 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
C4orf3-201ENST00000399075 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
C4orf3-201ENST00000399075 PMCHL1Q16048 86 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms