RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RPL29P47914 159 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-207ENST00000397411 MEOX2P50222 304 aa18.75■□□□□ 0.59
TSPAN4-207ENST00000397411 SAMD13Q5VXD3 122 aa18.75■□□□□ 0.59
TSPAN4-207ENST00000397411 PATE2Q6UY27 113 aa18.75■□□□□ 0.59
TSPAN4-207ENST00000397411 LINC00305Q7Z4B0 112 aa18.75■□□□□ 0.59
TSPAN4-207ENST00000397411 RETNQ9HD89 108 aa18.75■□□□□ 0.59
TSPAN4-207ENST00000397411 DNAJC4Q9NNZ3 241 aa18.75■□□□□ 0.59
TSPAN4-207ENST00000397411 KIR2DL5BA0A0G2JN68 375 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 KIR2DL5BA0A0G2JPC4 375 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 GIPP09681 153 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 B2MP61769 119 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 KIR2DL5AQ8N109 375 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 KIR2DL5BQ8NHK3 375 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 C16orf92Q96LL3 132 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 WWC2-AS2Q96NR7 200 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 SMIM3Q9BZL3 60 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 CSTL1Q9H114 145 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 PXMP4Q9Y6I8 212 aa18.74■□□□□ 0.59
TSPAN4-207ENST00000397411 KNCNA6PVL3 124 aa18.73■□□□□ 0.59
TSPAN4-207ENST00000397411 IFNA5P01569 189 aa18.73■□□□□ 0.59
TSPAN4-207ENST00000397411 OPCMLQ14982 345 aa18.73■□□□□ 0.59
TSPAN4-207ENST00000397411 ACTL10Q5JWF8 245 aa18.73■□□□□ 0.59
TSPAN4-207ENST00000397411 PFDN5Q99471 154 aa18.73■□□□□ 0.59
TSPAN4-207ENST00000397411 ATP5SQ99766 215 aa18.73■□□□□ 0.59
TSPAN4-207ENST00000397411 SLC39A9Q9NUM3 307 aa18.73■□□□□ 0.59
TSPAN4-207ENST00000397411 LYL1P12980 280 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 PSMB3P49720 205 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 PRR20EP86478 221 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 PRR20CP86479 221 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 PRR20DP86480 221 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 PRR20BP86481 221 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 PRR20AP86496 221 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 SCGB1C1Q8TD33 95 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 CHAC2Q8WUX2 184 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 NPCDR1Q9BY65 106 aa18.72■□□□□ 0.59
TSPAN4-207ENST00000397411 C17orf112F2Z3M2 114 aa18.71■□□□□ 0.59
TSPAN4-207ENST00000397411 ISLRO14498 428 aa18.71■□□□□ 0.59
TSPAN4-207ENST00000397411 LRRC20Q8TCA0 184 aa18.71■□□□□ 0.59
TSPAN4-207ENST00000397411 TMEM37Q8WXS4 190 aa18.71■□□□□ 0.59
TSPAN4-207ENST00000397411 COL7A1Q02388 2944 aa18.71■□□□□ 0.59
TSPAN4-207ENST00000397411 WDR61Q9GZS3 305 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-207ENST00000397411 KCNIP2Q9NS61 270 aa18.7■□□□□ 0.58
TSPAN4-207ENST00000397411 Q6ZWC4 215 aa18.69■□□□□ 0.58
TSPAN4-207ENST00000397411 AGRNO00468 2067 aa18.69■□□□□ 0.58
TSPAN4-207ENST00000397411 SPRY2O43597 315 aa18.68■□□□□ 0.58
TSPAN4-207ENST00000397411 DEFB135Q30KP9 77 aa18.68■□□□□ 0.58
TSPAN4-207ENST00000397411 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.68■□□□□ 0.58
TSPAN4-207ENST00000397411 BPIFA4PQ86YQ2 179 aa18.68■□□□□ 0.58
TSPAN4-207ENST00000397411 SOCS3O14543 225 aa18.67■□□□□ 0.58
TSPAN4-207ENST00000397411 GATAD1Q8WUU5 269 aa18.67■□□□□ 0.58
TSPAN4-207ENST00000397411 OVOL2Q9BRP0 275 aa18.67■□□□□ 0.58
TSPAN4-207ENST00000397411 RPRMQ9NS64 109 aa18.67■□□□□ 0.58
TSPAN4-207ENST00000397411 CA1P00915 261 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-207ENST00000397411 EBLN2Q6P2I7 272 aa18.66■□□□□ 0.58
TSPAN4-207ENST00000397411 TRPT1Q86TN4 253 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-207ENST00000397411 INO80EQ8NBZ0 244 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-207ENST00000397411 OR2T35Q8NGX2 323 aa18.66■□□□□ 0.58
TSPAN4-207ENST00000397411 Q5BKY6 102 aa18.65■□□□□ 0.58
TSPAN4-207ENST00000397411 MORN3Q6PF18 240 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-207ENST00000397411 TP53TG1Q9Y2A0 90 aa18.65■□□□□ 0.58
TSPAN4-207ENST00000397411 FXYD6-FXYD2A0A087WZ82 144 aa18.64■□□□□ 0.57
TSPAN4-207ENST00000397411 SPP1P10451 314 aa18.64■□□□□ 0.57
TSPAN4-207ENST00000397411 RNF183Q96D59 192 aa18.64■□□□□ 0.57
TSPAN4-207ENST00000397411 TRAV5A0A0B4J249 113 aa18.63■□□□□ 0.57
TSPAN4-207ENST00000397411 NUTF2P61970 127 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-207ENST00000397411 MORN5Q5VZ52 161 aa18.63■□□□□ 0.57
TSPAN4-207ENST00000397411 FOXI2Q6ZQN5 318 aa18.63■□□□□ 0.57
TSPAN4-207ENST00000397411 A0A087X0K7 114 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 H3BMM0 161 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 IGKV3-20P01619 116 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 SNRPCP09234 159 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 FAM78BQ5VT40 261 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 IGFL4Q6B9Z1 124 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 OR4B1Q8NGF8 309 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 C20orf173Q96LM9 149 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 C17orf77Q96MU5 243 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 AQP10Q96PS8 301 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 SAV1Q9H4B6 383 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 WFDC1Q9HC57 220 aa18.62■□□□□ 0.57
TSPAN4-207ENST00000397411 HLA-DRB4P13762 266 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 DEFB1P60022 68 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 TMEM41BQ5BJD5 291 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 GCSAMLQ5JQS6 135 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 FFAR4Q5NUL3 377 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 SPATA31B1PQ5VZV4 182 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 ZNF738Q8NE65 137 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 HLA-DRB4X5D2U9 266 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 NBEAL2Q6ZNJ1 2754 aa18.61■□□□□ 0.57
TSPAN4-207ENST00000397411 MRPS12O15235 138 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-207ENST00000397411 LCN15Q6UWW0 184 aa18.6■□□□□ 0.57
TSPAN4-207ENST00000397411 RNF182Q8N6D2 247 aa18.6■□□□□ 0.57
TSPAN4-207ENST00000397411 ZNF266Q14584 549 aa18.59■□□□□ 0.57
TSPAN4-207ENST00000397411 GDF5OSQ5U4N7 250 aa18.59■□□□□ 0.57
TSPAN4-207ENST00000397411 PARD6GQ9BYG4 376 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-207ENST00000397411 HUWE1Q7Z6Z7 4374 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-207ENST00000397411 TRAV8-2A0A0B4J237 113 aa18.58■□□□□ 0.56
TSPAN4-207ENST00000397411 F6UB75 175 aa18.58■□□□□ 0.56
TSPAN4-207ENST00000397411 H3BTX0 84 aa18.58■□□□□ 0.56
TSPAN4-207ENST00000397411 CXCL2P19875 107 aa18.58■□□□□ 0.56
TSPAN4-207ENST00000397411 RARRES2Q99969 163 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms