RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FUT9Q9Y231 359 aa17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 TRAV5A0A0B4J249 113 aa17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 OXLD1Q5BKU9 147 aa17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 MIR17HGQ75NE6 70 aa17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 RPRMQ9NS64 109 aa17.81■□□□□ 0.44
TSPAN4-203ENST00000397397 A0A1W2PPV4 95 aa17.8■□□□□ 0.44
TSPAN4-203ENST00000397397 RPL11P62913 178 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-203ENST00000397397 FAM90A2PQ658T7 463 aa17.8■□□□□ 0.44
TSPAN4-203ENST00000397397 SIGLEC15Q6ZMC9 328 aa17.8■□□□□ 0.44
TSPAN4-203ENST00000397397 RBPMS2Q6ZRY4 209 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-203ENST00000397397 NBEAL1Q6ZS30 2694 aa17.8■□□□□ 0.44
TSPAN4-203ENST00000397397 OR2K2Q8NGT1 345 aa17.8■□□□□ 0.44
TSPAN4-203ENST00000397397 PLA2G2EQ9NZK7 142 aa17.8■□□□□ 0.44
TSPAN4-203ENST00000397397 HELTA6NFD8 242 aa17.79■□□□□ 0.44
TSPAN4-203ENST00000397397 CD5P06127 495 aa17.79■□□□□ 0.44
TSPAN4-203ENST00000397397 TMEM61Q8N0U2 210 aa17.79■□□□□ 0.44
TSPAN4-203ENST00000397397 RPP25LQ8N5L8 163 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-203ENST00000397397 GPR82Q96P67 336 aa17.79■□□□□ 0.44
TSPAN4-203ENST00000397397 IGKV3-7A0A075B6H7 116 aa17.78■□□□□ 0.44
TSPAN4-203ENST00000397397 IZUMO1RA6ND01 250 aa17.78■□□□□ 0.44
TSPAN4-203ENST00000397397 CDC34P49427 236 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-203ENST00000397397 ACTR3CQ9C0K3 210 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-203ENST00000397397 TRAV25A0A0B4J276 109 aa17.77■□□□□ 0.44
TSPAN4-203ENST00000397397 UMAD1C9J7I0 102 aa17.77■□□□□ 0.44
TSPAN4-203ENST00000397397 WIPF1O43516 503 aa17.77■□□□□ 0.44
TSPAN4-203ENST00000397397 EIF3GO75821 320 aaKnown RBP eCLIP17.77■□□□□ 0.44
TSPAN4-203ENST00000397397 RPL7P18124 248 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-203ENST00000397397 GALR1P47211 349 aa17.77■□□□□ 0.44
TSPAN4-203ENST00000397397 LCN12Q6JVE5 192 aa17.77■□□□□ 0.44
TSPAN4-203ENST00000397397 SLC25A2Q9BXI2 301 aa17.77■□□□□ 0.44
TSPAN4-203ENST00000397397 BPIFA4PQ86YQ2 179 aa17.76■□□□□ 0.43
TSPAN4-203ENST00000397397 PKD1L1Q8TDX9 2849 aa17.76■□□□□ 0.43
TSPAN4-203ENST00000397397 G3V4G9 280 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 TSPAN4O14817 238 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 TAS2R45P59539 299 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 GUCA2BQ16661 112 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 GBGT1Q8N5D6 347 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 STXBP6Q8NFX7 210 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 RAB24Q969Q5 203 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 FAM167A-AS1Q96KT0 104 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 SMAD5-AS1Q9Y6J3 95 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 NOTCH3Q9UM47 2321 aa17.75■□□□□ 0.43
TSPAN4-203ENST00000397397 ZNF785A8K8V0 405 aa17.74■□□□□ 0.43
TSPAN4-203ENST00000397397 HMGB3O15347 200 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-203ENST00000397397 ATF4P18848 351 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-203ENST00000397397 KHDC3LQ587J8 217 aa17.74■□□□□ 0.43
TSPAN4-203ENST00000397397 SAMD5Q5TGI4 173 aa17.74■□□□□ 0.43
TSPAN4-203ENST00000397397 PHYHIPLQ96FC7 376 aa17.74■□□□□ 0.43
TSPAN4-203ENST00000397397 MRPS12O15235 138 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-203ENST00000397397 TFPI2P48307 235 aa17.73■□□□□ 0.43
TSPAN4-203ENST00000397397 PAFAH1B2P68402 229 aa17.73■□□□□ 0.43
TSPAN4-203ENST00000397397 ALKAL2Q6UX46 152 aa17.73■□□□□ 0.43
TSPAN4-203ENST00000397397 WFDC3Q8IUB2 231 aa17.73■□□□□ 0.43
TSPAN4-203ENST00000397397 MS4A6AQ9H2W1 248 aa17.73■□□□□ 0.43
TSPAN4-203ENST00000397397 CTXND1A0A1B0GTU2 59 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 DNASE2O00115 360 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 OR7C2O60412 319 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 FHITP49789 147 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 ZNF726P1Q15940 193 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 SSX7Q7RTT5 188 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 FAM213BQ8TBF2 198 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 SPAG8Q99932 426 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 OR51M1Q9H341 326 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 TMEM14CQ9P0S9 112 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 PYYP10082 97 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 GP9P14770 177 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 SULT1A2P50226 295 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 RAB5CP51148 216 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 FAM74A1Q5RGS3 127 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 DPPA3Q6W0C5 159 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 PAXXQ9BUH6 204 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 NRN1Q9NPD7 142 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 MGAM2Q2M2H8 2515 aa17.72■□□□□ 0.43
TSPAN4-203ENST00000397397 SNRPCP09234 159 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-203ENST00000397397 STAG3L2P0CL84 134 aa17.71■□□□□ 0.43
TSPAN4-203ENST00000397397 STAG3L3P0CL85 134 aa17.71■□□□□ 0.43
TSPAN4-203ENST00000397397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.7■□□□□ 0.42
TSPAN4-203ENST00000397397 ZNF503Q96F45 646 aa17.7■□□□□ 0.42
TSPAN4-203ENST00000397397 A0A087X0K7 114 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 OR4C46A6NHA9 309 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 H3BQ15 152 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 OR10J4P0C629 311 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 ARL14EPLP0DKL9 152 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 IGLC2P0DOY2 106 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 EGFEM1PQ0D2K5 195 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 LCN15Q6UWW0 184 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 PQLC2Q6ZP29 291 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 RNF141Q8WVD5 230 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 C17orf77Q96MU5 243 aa17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 ZMAT5Q9UDW3 170 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-203ENST00000397397 TRAV2A0A0B4J234 112 aa17.68■□□□□ 0.42
TSPAN4-203ENST00000397397 H3BTX0 84 aa17.68■□□□□ 0.42
TSPAN4-203ENST00000397397 HIST1H1EP10412 219 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-203ENST00000397397 MEOX2P50222 304 aa17.68■□□□□ 0.42
TSPAN4-203ENST00000397397 HRH4Q9H3N8 390 aa17.68■□□□□ 0.42
TSPAN4-203ENST00000397397 ZNF586Q9NXT0 402 aa17.68■□□□□ 0.42
TSPAN4-203ENST00000397397 ZNF256Q9Y2P7 627 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-203ENST00000397397 MAP1LC3B2A6NCE7 125 aa17.67■□□□□ 0.42
TSPAN4-203ENST00000397397 K7EQG2 157 aa17.67■□□□□ 0.42
TSPAN4-203ENST00000397397 CXorf1O96002 111 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms