RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NPIPB5A8MRT5 1133 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 NPIPB11E5RHQ5 1161 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 ITGB1BP1O14713 200 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 COX19Q49B96 90 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 SH2D6Q7Z4S9 175 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 FER1L6-AS2Q96M78 137 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 MGPP08493 103 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 AREGP15514 252 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 S100A4P26447 101 aaKnown RBP7.16□□□□□ -1.26
RTN4-206ENST00000394611 IGF2-ASQ6U949 168 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 BCL6BQ8N143 479 aaPredicted RBP7.16□□□□□ -1.26
RTN4-206ENST00000394611 TMEM75Q8N9X5 138 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 GPR82Q96P67 336 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 CHD8Q9HCK8 2581 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 RABAC1Q9UI14 185 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 TSSC4Q9Y5U2 329 aaPredicted RBP7.16□□□□□ -1.26
RTN4-206ENST00000394611 IGLV3-32A0A0A0MS00 114 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 IGHV2-70DA0A0C4DH43 119 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 A0A1B0GUT8 65 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 PMS2P5A8MQ11 134 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 CDKN1BP46527 198 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 FAM162BQ5T6X4 162 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 TPSG1Q9NRR2 321 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 EPDR1Q9UM22 224 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 HIGD1AQ9Y241 93 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 ADGRG4Q8IZF6 3080 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 IGKV1OR2-108A0A075B7D4 117 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 TMEM189A5PLL7 270 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 DNPH1O43598 174 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 WT1P19544 449 aaPredicted RBP7.16□□□□□ -1.26
RTN4-206ENST00000394611 FAM214BQ7L5A3 538 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 SPATA12Q7Z6I5 190 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 Q8TCH9 128 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 RPEQ96AT9 228 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 C1RLQ9NZP8 487 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 TAX1BP3O14907 124 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 HIST1H1AQ02539 215 aaPredicted RBP7.16□□□□□ -1.26
RTN4-206ENST00000394611 DAZAP2Q15038 168 aaPredicted RBP7.16□□□□□ -1.26
RTN4-206ENST00000394611 FOXA2Q9Y261 457 aaPredicted RBP7.16□□□□□ -1.26
RTN4-206ENST00000394611 INSIG2Q9Y5U4 225 aa7.16□□□□□ -1.26
RTN4-206ENST00000394611 USP9YO00507 2555 aaPredicted RBP7.15□□□□□ -1.26
RTN4-206ENST00000394611 SRRM4A7MD48 611 aaKnown RBP7.15□□□□□ -1.26
RTN4-206ENST00000394611 F5H697 171 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 NDUFB3O43676 98 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 SMIM13P0DJ93 91 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 PSMB2P49721 201 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 BRWD1-AS2P59051 145 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 FAM27E3Q08E93 113 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 RNFT1Q5M7Z0 435 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 RBPMS2Q6ZRY4 209 aaKnown RBP7.15□□□□□ -1.26
RTN4-206ENST00000394611 RNF7Q9UBF6 113 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 PCSK5Q92824 1860 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 TCRAP04437 139 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 FAM106CPP0CH98 169 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 RPL27AP46776 148 aaKnown RBP7.15□□□□□ -1.26
RTN4-206ENST00000394611 FAM106AQ4KMX7 169 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 GDF5OSQ5U4N7 250 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 FOXL2NBQ6ZUU3 175 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 JMJD8Q96S16 334 aa7.15□□□□□ -1.26
RTN4-206ENST00000394611 ZNF71Q9NQZ8 489 aaPredicted RBP7.15□□□□□ -1.26
RTN4-206ENST00000394611 MRPS16Q9Y3D3 137 aaKnown RBP7.15□□□□□ -1.26
RTN4-206ENST00000394611 IGKV1D-17A0A075B6S4 117 aa7.15□□□□□ -1.27
RTN4-206ENST00000394611 IGKV2-40A0A087WW87 121 aaPredicted RBP7.15□□□□□ -1.27
RTN4-206ENST00000394611 TEX48A0A1B0GUV7 120 aa7.15□□□□□ -1.27
RTN4-206ENST00000394611 IGKV2D-40P01614 121 aaPredicted RBP7.15□□□□□ -1.27
RTN4-206ENST00000394611 MZT1Q08AG7 82 aa7.15□□□□□ -1.27
RTN4-206ENST00000394611 ZNF146Q15072 292 aa7.15□□□□□ -1.27
RTN4-206ENST00000394611 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.27
RTN4-206ENST00000394611 LRRC10Q5BKY1 277 aa7.15□□□□□ -1.27
RTN4-206ENST00000394611 ARPC1AQ92747 370 aa7.15□□□□□ -1.27
RTN4-206ENST00000394611 SPRR3Q9UBC9 169 aa7.15□□□□□ -1.27
RTN4-206ENST00000394611 C21orf140B9A014 251 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 H3BMG7 143 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.14□□□□□ -1.27
RTN4-206ENST00000394611 CD69Q07108 199 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 C17orf77Q96MU5 243 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 ST20Q9HBF5 79 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 RAB9BQ9NP90 201 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 JPT1Q9UK76 154 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 KIR2DL2P43627 348 aaPredicted RBP7.14□□□□□ -1.27
RTN4-206ENST00000394611 ADAMTSL5Q6ZMM2 481 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 ZADH2Q8N4Q0 377 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 C9JCJ5 164 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 AZU1P20160 251 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 GCSAMQ8N6F7 178 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 ZNF257Q9Y2Q1 563 aa7.14□□□□□ -1.27
RTN4-206ENST00000394611 CNTFRP26992 372 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 LEPP41159 167 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 Q71RC1 249 aaPredicted RBP7.13□□□□□ -1.27
RTN4-206ENST00000394611 FAM90A1Q86YD7 464 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 C9orf106Q8NAJ2 232 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 CSTL1Q9H114 145 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 DKK2Q9UBU2 259 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 IGKV3D-15A0A087WSY6 115 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 IGKV3-15P01624 115 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 ECSCRQ19T08 205 aa7.13□□□□□ -1.27
RTN4-206ENST00000394611 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms