RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 PRR20BP86481 221 aa15.3■□□□□ 0.04
CDCA4-202ENST00000392590 PRR20AP86496 221 aa15.3■□□□□ 0.04
CDCA4-202ENST00000392590 WWC2-AS2Q96NR7 200 aa15.3■□□□□ 0.04
CDCA4-202ENST00000392590 RNF24Q9Y225 148 aa15.3■□□□□ 0.04
CDCA4-202ENST00000392590 UBE2CO00762 179 aa15.29■□□□□ 0.04
CDCA4-202ENST00000392590 LYL1P12980 280 aa15.29■□□□□ 0.04
CDCA4-202ENST00000392590 STHQ8IWL8 128 aa15.29■□□□□ 0.04
CDCA4-202ENST00000392590 DNAJC4Q9NNZ3 241 aa15.29■□□□□ 0.04
CDCA4-202ENST00000392590 HSPB11Q9Y547 144 aa15.29■□□□□ 0.04
CDCA4-202ENST00000392590 KNCNA6PVL3 124 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 RPL7P18124 248 aaKnown RBP15.28■□□□□ 0.04
CDCA4-202ENST00000392590 MEOX2P50222 304 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 B2MP61769 119 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 OPCMLQ14982 345 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 SAMD13Q5VXD3 122 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 C10orf113Q5VZT2 155 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 LINC00305Q7Z4B0 112 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 ASB13Q8WXK3 278 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 TMEM37Q8WXS4 190 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 CSTL1Q9H114 145 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 SLC39A9Q9NUM3 307 aa15.28■□□□□ 0.04
CDCA4-202ENST00000392590 SOCS3O14543 225 aa15.27■□□□□ 0.04
CDCA4-202ENST00000392590 GIPP09681 153 aaPredicted RBP15.27■□□□□ 0.04
CDCA4-202ENST00000392590 FGL1Q08830 312 aa15.27■□□□□ 0.04
CDCA4-202ENST00000392590 ACTL10Q5JWF8 245 aa15.27■□□□□ 0.04
CDCA4-202ENST00000392590 OR1L4Q8NGR5 311 aa15.27■□□□□ 0.04
CDCA4-202ENST00000392590 LINC00052Q96N35 136 aa15.27■□□□□ 0.04
CDCA4-202ENST00000392590 NPCDR1Q9BY65 106 aa15.27■□□□□ 0.04
CDCA4-202ENST00000392590 PXMP4Q9Y6I8 212 aa15.27■□□□□ 0.04
CDCA4-202ENST00000392590 ISLRO14498 428 aa15.27■□□□□ 0.03
CDCA4-202ENST00000392590 PSMB3P49720 205 aa15.27■□□□□ 0.03
CDCA4-202ENST00000392590 Q6ZWC4 215 aa15.27■□□□□ 0.03
CDCA4-202ENST00000392590 C16orf92Q96LL3 132 aa15.27■□□□□ 0.03
CDCA4-202ENST00000392590 ATP5SQ99766 215 aa15.27■□□□□ 0.03
CDCA4-202ENST00000392590 ATF4P18848 351 aaPredicted RBP15.26■□□□□ 0.03
CDCA4-202ENST00000392590 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.26■□□□□ 0.03
CDCA4-202ENST00000392590 C17orf77Q96MU5 243 aa15.26■□□□□ 0.03
CDCA4-202ENST00000392590 PFDN5Q99471 154 aa15.26■□□□□ 0.03
CDCA4-202ENST00000392590 SMIM3Q9BZL3 60 aa15.26■□□□□ 0.03
CDCA4-202ENST00000392590 WDR61Q9GZS3 305 aaKnown RBP15.26■□□□□ 0.03
CDCA4-202ENST00000392590 ZNF709Q8N972 641 aa15.25■□□□□ 0.03
CDCA4-202ENST00000392590 OVOL2Q9BRP0 275 aa15.25■□□□□ 0.03
CDCA4-202ENST00000392590 DEFB135Q30KP9 77 aa15.24■□□□□ 0.03
CDCA4-202ENST00000392590 Q5BKY6 102 aa15.24■□□□□ 0.03
CDCA4-202ENST00000392590 TRPT1Q86TN4 253 aaKnown RBP15.24■□□□□ 0.03
CDCA4-202ENST00000392590 SPRY2O43597 315 aa15.23■□□□□ 0.03
CDCA4-202ENST00000392590 IFNA5P01569 189 aa15.23■□□□□ 0.03
CDCA4-202ENST00000392590 TP53TG1Q9Y2A0 90 aa15.23■□□□□ 0.03
CDCA4-202ENST00000392590 MORN5Q5VZ52 161 aa15.22■□□□□ 0.03
CDCA4-202ENST00000392590 BPIFA4PQ86YQ2 179 aa15.22■□□□□ 0.03
CDCA4-202ENST00000392590 SCGB1C1Q8TD33 95 aa15.22■□□□□ 0.03
CDCA4-202ENST00000392590 GATAD1Q8WUU5 269 aa15.22■□□□□ 0.03
CDCA4-202ENST00000392590 C17orf112F2Z3M2 114 aa15.22■□□□□ 0.03
CDCA4-202ENST00000392590 CA1P00915 261 aaPredicted RBP15.22■□□□□ 0.03
CDCA4-202ENST00000392590 RNF183Q96D59 192 aa15.22■□□□□ 0.03
CDCA4-202ENST00000392590 KCNIP2Q9NS61 270 aa15.22■□□□□ 0.03
CDCA4-202ENST00000392590 NBEAL2Q6ZNJ1 2754 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 A0A087X0K7 114 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 TRAV5A0A0B4J249 113 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 H3BMM0 161 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 MRPS12O15235 138 aaKnown RBP15.21■□□□□ 0.03
CDCA4-202ENST00000392590 SPP1P10451 314 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 MORN3Q6PF18 240 aaPredicted RBP15.21■□□□□ 0.03
CDCA4-202ENST00000392590 OR2T35Q8NGX2 323 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 LRRC20Q8TCA0 184 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 C20orf173Q96LM9 149 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 RPRMQ9NS64 109 aa15.21■□□□□ 0.03
CDCA4-202ENST00000392590 HUWE1Q7Z6Z7 4374 aaKnown RBP15.2■□□□□ 0.02
CDCA4-202ENST00000392590 HLA-DRB4P13762 266 aa15.2■□□□□ 0.02
CDCA4-202ENST00000392590 DEFB1P60022 68 aa15.2■□□□□ 0.02
CDCA4-202ENST00000392590 FOXI2Q6ZQN5 318 aa15.2■□□□□ 0.02
CDCA4-202ENST00000392590 SAV1Q9H4B6 383 aaPredicted RBP15.2■□□□□ 0.02
CDCA4-202ENST00000392590 EDA2RQ9HAV5 297 aa15.2■□□□□ 0.02
CDCA4-202ENST00000392590 WFDC1Q9HC57 220 aa15.2■□□□□ 0.02
CDCA4-202ENST00000392590 HLA-DRB4X5D2U9 266 aa15.2■□□□□ 0.02
CDCA4-202ENST00000392590 TRAV8-2A0A0B4J237 113 aa15.19■□□□□ 0.02
CDCA4-202ENST00000392590 GCSAMLQ5JQS6 135 aa15.19■□□□□ 0.02
CDCA4-202ENST00000392590 GDF5OSQ5U4N7 250 aa15.19■□□□□ 0.02
CDCA4-202ENST00000392590 IGFL4Q6B9Z1 124 aa15.19■□□□□ 0.02
CDCA4-202ENST00000392590 EBLN2Q6P2I7 272 aa15.19■□□□□ 0.02
CDCA4-202ENST00000392590 AQP10Q96PS8 301 aa15.19■□□□□ 0.02
CDCA4-202ENST00000392590 SNRPCP09234 159 aaKnown RBP15.18■□□□□ 0.02
CDCA4-202ENST00000392590 RNF182Q8N6D2 247 aa15.18■□□□□ 0.02
CDCA4-202ENST00000392590 INO80EQ8NBZ0 244 aaPredicted RBP15.18■□□□□ 0.02
CDCA4-202ENST00000392590 PARD6GQ9BYG4 376 aaPredicted RBP15.18■□□□□ 0.02
CDCA4-202ENST00000392590 TENM3Q9P273 2699 aa15.18■□□□□ 0.02
CDCA4-202ENST00000392590 GIG44P09565 113 aaPredicted RBP15.17■□□□□ 0.02
CDCA4-202ENST00000392590 NUTF2P61970 127 aaKnown RBP15.17■□□□□ 0.02
CDCA4-202ENST00000392590 TMEM41BQ5BJD5 291 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 FAM78BQ5VT40 261 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 SPATA31B1PQ5VZV4 182 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 STAB2Q8WWQ8 2551 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 FXYD6-FXYD2A0A087WZ82 144 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 F6UB75 175 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 CXCL2P19875 107 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 LCN15Q6UWW0 184 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 OR4B1Q8NGF8 309 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 HRH4Q9H3N8 390 aa15.17■□□□□ 0.02
CDCA4-202ENST00000392590 IGKV3-20P01619 116 aa15.16■□□□□ 0.02
CDCA4-202ENST00000392590 IGLC2P0DOY2 106 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms