RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 S100A10P60903 97 aa12.23□□□□□ -0.45
HMGN4-201ENST00000377575 SLC38A11Q08AI6 406 aa12.23□□□□□ -0.45
HMGN4-201ENST00000377575 EBLN2Q6P2I7 272 aa12.23□□□□□ -0.45
HMGN4-201ENST00000377575 SHANK2-AS3Q9BTD1 123 aa12.23□□□□□ -0.45
HMGN4-201ENST00000377575 RSG1Q9BU20 258 aa12.23□□□□□ -0.45
HMGN4-201ENST00000377575 SCRT1Q9BWW7 348 aa12.23□□□□□ -0.45
HMGN4-201ENST00000377575 RPRMQ9NS64 109 aa12.23□□□□□ -0.45
HMGN4-201ENST00000377575 DEFB4AO15263 64 aa12.22□□□□□ -0.45
HMGN4-201ENST00000377575 RPL7P18124 248 aaKnown RBP12.22□□□□□ -0.45
HMGN4-201ENST00000377575 ARL16Q0P5N6 197 aa12.22□□□□□ -0.45
HMGN4-201ENST00000377575 PXDC1Q5TGL8 231 aa12.22□□□□□ -0.45
HMGN4-201ENST00000377575 GDF5OSQ5U4N7 250 aa12.22□□□□□ -0.45
HMGN4-201ENST00000377575 CSNK1G2-AS1Q8NCQ2 148 aa12.22□□□□□ -0.45
HMGN4-201ENST00000377575 PHLDA1Q8WV24 401 aaPredicted RBP12.22□□□□□ -0.45
HMGN4-201ENST00000377575 ARL6Q9H0F7 186 aa12.22□□□□□ -0.45
HMGN4-201ENST00000377575 IGHV4-28A0A0C4DH34 117 aa12.21□□□□□ -0.45
HMGN4-201ENST00000377575 GOSR2O14653 212 aa12.21□□□□□ -0.45
HMGN4-201ENST00000377575 NANOS2P60321 138 aaKnown RBP12.21□□□□□ -0.45
HMGN4-201ENST00000377575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.21□□□□□ -0.45
HMGN4-201ENST00000377575 CLUHP3Q96NS8 147 aa12.21□□□□□ -0.45
HMGN4-201ENST00000377575 BATF3Q9NR55 127 aa12.21□□□□□ -0.45
HMGN4-201ENST00000377575 XCL2Q9UBD3 114 aa12.21□□□□□ -0.45
HMGN4-201ENST00000377575 X6R8D5 127 aa12.21□□□□□ -0.45
HMGN4-201ENST00000377575 DNAH1Q9P2D7 4330 aa12.21□□□□□ -0.46
HMGN4-201ENST00000377575 PLECQ15149 4684 aaKnown RBP12.2□□□□□ -0.46
HMGN4-201ENST00000377575 AGPAT2O15120 278 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 IGKV3-20P01619 116 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 DEFB1P60022 68 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 RAB31Q13636 194 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 STX12Q86Y82 276 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 UHRF2Q96PU4 802 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 HRH4Q9H3N8 390 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 C11orf1Q9H5F2 150 aa12.2□□□□□ -0.46
HMGN4-201ENST00000377575 LYRM2Q9NU23 88 aaPredicted RBP12.2□□□□□ -0.46
HMGN4-201ENST00000377575 PRAF2O60831 178 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 CST7O76096 145 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 DEFA1P59665 94 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 DEFA3P59666 94 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 FGL1Q08830 312 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 RAB32Q13637 225 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 LINC00476Q8WZB0 136 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 C20orf173Q96LM9 149 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 MGST2Q99735 147 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 ARV1Q9H2C2 271 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 UQCC1Q9NVA1 299 aa12.19□□□□□ -0.46
HMGN4-201ENST00000377575 A0A0J9YX75 114 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 FAM24AA6NFZ4 105 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 COX7A2P2O60397 106 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 RBMY1A1P0DJD3 496 aaKnown RBP12.18□□□□□ -0.46
HMGN4-201ENST00000377575 RBMY1CP0DJD4 496 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 SULT1A1P50225 295 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 HBG1P69891 147 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 HBG2P69892 147 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 PSG9Q00887 426 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 IFITM3Q01628 133 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 IL15RAQ13261 267 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 RBMY1FQ15415 496 aaKnown RBP12.18□□□□□ -0.46
HMGN4-201ENST00000377575 FAM78BQ5VT40 261 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 NRARPQ7Z6K4 114 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 C17orf77Q96MU5 243 aa12.18□□□□□ -0.46
HMGN4-201ENST00000377575 A0A087X0K7 114 aa12.17□□□□□ -0.46
HMGN4-201ENST00000377575 F6UB75 175 aa12.17□□□□□ -0.46
HMGN4-201ENST00000377575 S100A11P31949 105 aa12.17□□□□□ -0.46
HMGN4-201ENST00000377575 CAMLGP49069 296 aa12.17□□□□□ -0.46
HMGN4-201ENST00000377575 PATE2Q6UY27 113 aa12.17□□□□□ -0.46
HMGN4-201ENST00000377575 LINC00305Q7Z4B0 112 aa12.17□□□□□ -0.46
HMGN4-201ENST00000377575 ZNF709Q8N972 641 aa12.17□□□□□ -0.46
HMGN4-201ENST00000377575 ELOA3CA0A087WX78 387 aaPredicted RBP12.16□□□□□ -0.46
HMGN4-201ENST00000377575 UBE2L5PA0A1B0GUS4 154 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 C11orf94C9JXX5 98 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 INMT-MINDY4F8WBC2 141 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 FXYD7P58549 80 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 VWC2Q2TAL6 325 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 ZNF705AQ6ZN79 300 aaPredicted RBP12.16□□□□□ -0.46
HMGN4-201ENST00000377575 Q6ZRG5 221 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 TMEM252Q8N6L7 170 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 LRRC20Q8TCA0 184 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 NEU1Q99519 415 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 NMES1Q9C002 83 aa12.16□□□□□ -0.46
HMGN4-201ENST00000377575 TRAV8-2A0A0B4J237 113 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 IGSF23A1L1A6 192 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 DUSP14O95147 198 aaKnown RBP12.15□□□□□ -0.46
HMGN4-201ENST00000377575 LY6G6CO95867 125 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 CXCL2P19875 107 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 BAXQ07812 192 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 C10orf113Q5VZT2 155 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 RNF182Q8N6D2 247 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 ZNF738Q8NE65 137 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 SLC35B3Q9H1N7 401 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 GOLT1BQ9Y3E0 138 aa12.15□□□□□ -0.46
HMGN4-201ENST00000377575 TMEM189A5PLL7 270 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 SMIM9A6NGZ8 99 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 A8MTW9 85 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 ZNF705FA8MVS1 300 aaPredicted RBP12.14□□□□□ -0.47
HMGN4-201ENST00000377575 RLN2P04090 185 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 ZNF705DP0CH99 300 aaPredicted RBP12.14□□□□□ -0.47
HMGN4-201ENST00000377575 ZNF705BP0CI00 300 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms