RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RAB4AP20338 218 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 PRSS8Q16651 343 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 TEX43Q6ZNM6 134 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 TGIF2LXQ8IUE1 241 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 OR1L6Q8NGR2 347 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 FLYWCH2Q96CP2 140 aaKnown RBP9.76□□□□□ -0.85
VRK3-202ENST00000377011 ZNF503Q96F45 646 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 MRPL20Q9BYC9 149 aaKnown RBP9.76□□□□□ -0.85
VRK3-202ENST00000377011 LY6LH3BQJ8 138 aa9.75□□□□□ -0.85
VRK3-202ENST00000377011 OR7C2O60412 319 aa9.75□□□□□ -0.85
VRK3-202ENST00000377011 ACTL6BO94805 426 aa9.75□□□□□ -0.85
VRK3-202ENST00000377011 SNRPCP09234 159 aaKnown RBP9.75□□□□□ -0.85
VRK3-202ENST00000377011 MYOD1P15172 320 aa9.75□□□□□ -0.85
VRK3-202ENST00000377011 CX3CL1P78423 397 aa9.75□□□□□ -0.85
VRK3-202ENST00000377011 THAP8Q8NA92 274 aa9.75□□□□□ -0.85
VRK3-202ENST00000377011 ZNF747Q9BV97 191 aa9.75□□□□□ -0.85
VRK3-202ENST00000377011 MEGF8Q7Z7M0 2845 aa9.75□□□□□ -0.85
VRK3-202ENST00000377011 ZNF705FA8MVS1 300 aaPredicted RBP9.74□□□□□ -0.85
VRK3-202ENST00000377011 NDUFA7O95182 113 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 ZNF705DP0CH99 300 aaPredicted RBP9.74□□□□□ -0.85
VRK3-202ENST00000377011 ZNF705BP0CI00 300 aaPredicted RBP9.74□□□□□ -0.85
VRK3-202ENST00000377011 CRYBB3P26998 211 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 MC5RP33032 325 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 OR10J3Q5JRS4 329 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 RASL11AQ6T310 242 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 OR5AU1Q8NGC0 362 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 IGF2BP2-AS1Q96M15 143 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
VRK3-202ENST00000377011 DNAJC4Q9NNZ3 241 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 WASHC3Q9Y3C0 194 aa9.74□□□□□ -0.85
VRK3-202ENST00000377011 TBL2Q9Y4P3 447 aaKnown RBP9.74□□□□□ -0.85
VRK3-202ENST00000377011 A6NDX4 124 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 SH2D7A6NKC9 451 aaPredicted RBP9.73□□□□□ -0.85
VRK3-202ENST00000377011 GGTLC3B5MD39 225 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 FCN1O00602 326 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 REG1AP05451 166 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 CBLN1P23435 193 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 PROK1P58294 105 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 ZNF124Q15973 351 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 TMEM183BQ1AE95 376 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 PVRIGQ6DKI7 326 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 FAM231DQ6ZW35 169 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 BAGE3Q86Y29 109 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 BAGE2Q86Y30 109 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 OR9G1Q8NH87 305 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 WFDC12Q8WWY7 111 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 ST6GALNAC6Q969X2 333 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 FAM167A-AS1Q96KT0 104 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 MIEN1Q9BRT3 115 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 CHRDL1Q9BU40 450 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 SNHG12Q9BXW3 62 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 SMIM27A0A1W2PRY6 76 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 TCRBV4S1A1TA0A5B7 111 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 CLPSL1A2RUU4 121 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 BUB1B-PAK6H3BSN5 160 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 SLC17A3O00476 420 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 NUPR1O60356 82 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 HTR1DP28221 377 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 VMA21Q3ZAQ7 101 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 ETFRF1Q6IPR1 90 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 STXBP6Q8NFX7 210 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 OR10X1Q8NGY0 326 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 SMIM12Q96EX1 92 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 SLC25A2Q9BXI2 301 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 TP53TG3Q9ULZ0 132 aa9.73□□□□□ -0.85
VRK3-202ENST00000377011 SNURFLB1AK76 121 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 EREGO14944 169 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 IGLV2-8P01709 118 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 HLA-DQA1P01909 254 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 BRS3P32247 399 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 LGALS7P47929 136 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 BLCAPP62952 87 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 UBE2L3P68036 154 aaKnown RBP9.72□□□□□ -0.85
VRK3-202ENST00000377011 TMEM95Q3KNT9 176 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 TPTE2P1Q5T6R2 138 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 Q6ZWC4 215 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 DPM3Q9P2X0 92 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 RNF114Q9Y508 228 aa9.72□□□□□ -0.85
VRK3-202ENST00000377011 NOTCH1P46531 2555 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 COX7A2P2O60397 106 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 SERF1AO75920 110 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 IGLV2-23P01705 113 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 AMY1AP04745 511 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 REG1BP48304 166 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 MINOS1Q5TGZ0 78 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 C10orf113Q5VZT2 155 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 MOB3BQ86TA1 216 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 OR8I2Q8N0Y5 310 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 OR10W1Q8NGF6 305 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 WIPF2Q8TF74 440 aaPredicted RBP9.71□□□□□ -0.85
VRK3-202ENST00000377011 SAMD10Q9BYL1 202 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 ZNF702PQ9H963 129 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 MINOS1-NBL1R4GNA1 71 aa9.71□□□□□ -0.85
VRK3-202ENST00000377011 GRIFINA4D1Z8 144 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 LINC00310P59036 64 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
VRK3-202ENST00000377011 IBA57Q5T440 356 aaKnown RBP9.7□□□□□ -0.86
VRK3-202ENST00000377011 TOMM20LQ6UXN7 152 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 TEX45Q8NA69 505 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms