RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 HIST1H2BKO60814 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H2BJP06899 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 MGST1P10620 155 aaKnown RBP13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H2BOP23527 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H2BBP33778 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H2BDP58876 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H2BCP62807 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST2H2BEQ16778 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 C9orf152Q5JTZ5 239 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H2BHQ93079 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 BTF3L4Q96K17 158 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 CCDC140Q96MF4 163 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H2BNQ99877 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H2BMQ99879 126 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 OSTCQ9NRP0 149 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 IL36BQ9NZH7 164 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 RNF24Q9Y225 148 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 V9GYV3 84 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 SVEP1Q4LDE5 3571 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 TRBV19A0A075B6N1 114 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 UBE2G1P62253 170 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 Q5PR19 223 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 NHLRC2Q8NBF2 726 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 FRZBQ92765 325 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 EEF1AKMT3Q96AZ1 226 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 ZNF414Q96IQ9 312 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 PITPNC1Q9UKF7 332 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 NOTCH2Q04721 2471 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 M0QZK8 103 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 TCRAP04437 139 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 FABP9Q0Z7S8 132 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 MS4A10Q96PG2 267 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 RNASE7Q9H1E1 156 aaKnown RBP13.08□□□□□ -0.32
HLA-A-202ENST00000376806 GAR1Q9NY12 217 aaKnown RBP13.08□□□□□ -0.32
HLA-A-202ENST00000376806 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.32
HLA-A-202ENST00000376806 TGFAP01135 160 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 TRGC1P0CF51 173 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 AKR1D1P51857 326 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 RPEL1Q2QD12 228 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 BAGE2Q86Y30 109 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 TMEM190Q8WZ59 177 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 CELSR1Q9NYQ6 3014 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 CCDC168Q8NDH2 2452 aa13.07□□□□□ -0.32
HLA-A-202ENST00000376806 IGHG2P01859 326 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 IGF1P05019 195 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 IGHV4-31P0DP07 118 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 IBA57Q5T440 356 aaKnown RBP13.06□□□□□ -0.32
HLA-A-202ENST00000376806 EXOC3-AS1Q8N2X6 119 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 FMC1Q96HJ9 113 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 TRAV9-1A0A075B6T8 112 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 TRBV7-1A0A0A6YYK4 115 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 ZNF320A2RRD8 509 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 BMPR1BO00238 502 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 CLEC3BP05452 202 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 S100A9P06702 114 aaKnown RBP13.06□□□□□ -0.32
HLA-A-202ENST00000376806 CLEC19AQ6UXS0 136 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 SIGLEC15Q6ZMC9 328 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 C17orf77Q96MU5 243 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 ZFAND3Q9H8U3 227 aa13.06□□□□□ -0.32
HLA-A-202ENST00000376806 FAM223BA6NKX1 122 aa13.05□□□□□ -0.32
HLA-A-202ENST00000376806 ACTL10Q5JWF8 245 aa13.05□□□□□ -0.32
HLA-A-202ENST00000376806 FAM223AQ8IWN6 122 aa13.05□□□□□ -0.32
HLA-A-202ENST00000376806 LYPD1Q8N2G4 141 aa13.05□□□□□ -0.32
HLA-A-202ENST00000376806 CMTM2Q8TAZ6 248 aa13.05□□□□□ -0.32
HLA-A-202ENST00000376806 SMIM12Q96EX1 92 aa13.05□□□□□ -0.32
HLA-A-202ENST00000376806 IGHV3-35A0A0C4DH35 117 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 NDUFA6P56556 154 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 ATP5G2Q06055 141 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 DEFB112Q30KQ8 113 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 TOMM20LQ6UXN7 152 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 SGK494Q96LW2 274 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 GNB4Q9HAV0 340 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 PDE6HQ13956 83 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 FAM231DQ6ZW35 169 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 GPR82Q96P67 336 aa13.04□□□□□ -0.32
HLA-A-202ENST00000376806 PRRC2AP48634 2157 aaKnown RBP13.03□□□□□ -0.32
HLA-A-202ENST00000376806 LTAP01374 205 aa13.03□□□□□ -0.32
HLA-A-202ENST00000376806 TRGV3P03979 118 aa13.03□□□□□ -0.32
HLA-A-202ENST00000376806 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
HLA-A-202ENST00000376806 S100A7P31151 101 aa13.03□□□□□ -0.32
HLA-A-202ENST00000376806 RPL15P61313 204 aaKnown RBP13.03□□□□□ -0.32
HLA-A-202ENST00000376806 Q86TA4 180 aa13.03□□□□□ -0.32
HLA-A-202ENST00000376806 ATP6V0BQ99437 205 aa13.03□□□□□ -0.32
HLA-A-202ENST00000376806 ZFHX3Q15911 3703 aa13.02□□□□□ -0.32
HLA-A-202ENST00000376806 IGHV3OR16-8A0A075B7F1 116 aa13.02□□□□□ -0.32
HLA-A-202ENST00000376806 FSHBP01225 129 aa13.02□□□□□ -0.32
HLA-A-202ENST00000376806 BLCAPP62952 87 aa13.02□□□□□ -0.32
HLA-A-202ENST00000376806 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.32
HLA-A-202ENST00000376806 MBD6Q96DN6 1003 aa13.02□□□□□ -0.32
HLA-A-202ENST00000376806 NOL4LQ96MY1 436 aaPredicted RBP13.02□□□□□ -0.32
HLA-A-202ENST00000376806 ZNF705GA8MUZ8 300 aaPredicted RBP13.02□□□□□ -0.33
HLA-A-202ENST00000376806 H3BUA1 57 aa13.02□□□□□ -0.33
HLA-A-202ENST00000376806 BRI3O95415 125 aa13.02□□□□□ -0.33
HLA-A-202ENST00000376806 IGHV4-59P01825 116 aa13.02□□□□□ -0.33
HLA-A-202ENST00000376806 HOXA5P20719 270 aa13.02□□□□□ -0.33
HLA-A-202ENST00000376806 PPIFP30405 207 aaKnown RBP13.02□□□□□ -0.33
HLA-A-202ENST00000376806 PRR27Q6MZM9 219 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms