RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
SRPK1-204ENST00000373825 SLC25A2Q9BXI2 301 aa12.59□□□□□ -0.39
SRPK1-204ENST00000373825 IGLL5B9A064 214 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 ZNF688P0C7X2 276 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 C2orf82Q6UX34 121 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 C11orf52Q96A22 123 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 PROCRQ9UNN8 238 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 TRBV7-9A0A0J9YWB2 115 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 TMEM42Q69YG0 159 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 CLPSP04118 112 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 CXCL12P48061 93 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.58□□□□□ -0.4
SRPK1-204ENST00000373825 PHLDA3Q9Y5J5 127 aa12.58□□□□□ -0.4
SRPK1-204ENST00000373825 PRR33A8MZF0 331 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 SAA2P0DJI9 122 aaPredicted RBP12.57□□□□□ -0.4
SRPK1-204ENST00000373825 COL6A6A6NMZ7 2263 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 C9orf172C9J069 976 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 CCL8P80075 99 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 ZNF329Q86UD4 541 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 SIGLEC8Q9NYZ4 499 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 CHCHD2Q9Y6H1 151 aaPredicted RBP12.57□□□□□ -0.4
SRPK1-204ENST00000373825 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
SRPK1-204ENST00000373825 TCRBV4S1A1TA0A5B7 111 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 LGALS9BQ3B8N2 356 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 LGALS9CQ6DKI2 356 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
SRPK1-204ENST00000373825 A0A1W2PQM1 296 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 NRN1LQ496H8 165 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 ODF3L1Q8IXM7 274 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 RNF7Q9UBF6 113 aa12.57□□□□□ -0.4
SRPK1-204ENST00000373825 C6orf15Q6UXA7 325 aaPredicted RBP12.56□□□□□ -0.4
SRPK1-204ENST00000373825 OSR1Q8TAX0 266 aaPredicted RBP12.56□□□□□ -0.4
SRPK1-204ENST00000373825 NEU4Q8WWR8 484 aaPredicted RBP12.56□□□□□ -0.4
SRPK1-204ENST00000373825 ZNF562Q6V9R5 426 aa12.56□□□□□ -0.4
SRPK1-204ENST00000373825 Q6ZS49 121 aa12.56□□□□□ -0.4
SRPK1-204ENST00000373825 ITLN1Q8WWA0 313 aa12.56□□□□□ -0.4
SRPK1-204ENST00000373825 OTORQ9NRC9 128 aa12.56□□□□□ -0.4
SRPK1-204ENST00000373825 UPK2O00526 184 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 RNASE1P07998 156 aaKnown RBP12.55□□□□□ -0.4
SRPK1-204ENST00000373825 RSPO1Q2MKA7 263 aaPredicted RBP12.55□□□□□ -0.4
SRPK1-204ENST00000373825 PRR14LQ5THK1 2151 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 FAM74A4Q5TZK3 123 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 C15orf53Q8NAA6 179 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 SMPXQ9UHP9 88 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 YLPM1P49750 1951 aaKnown RBP12.55□□□□□ -0.4
SRPK1-204ENST00000373825 PCDH15Q96QU1 1955 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 TRBV25-1A0A075B6N4 114 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 IGHV3-49A0A0A0MS15 119 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 NPC2P61916 151 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 SCN10AQ9Y5Y9 1956 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 LTBP4Q8N2S1 1624 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 PMS2P5A8MQ11 134 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 FOXI1Q12951 378 aa12.55□□□□□ -0.4
SRPK1-204ENST00000373825 PCNTO95613 3336 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 PRCDQ00LT1 54 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 KLF5Q13887 457 aaPredicted RBP12.54□□□□□ -0.4
SRPK1-204ENST00000373825 PCNX2A6NKB5 2137 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 PAPPA2Q9BXP8 1791 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 SIVA1O15304 175 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 RRN3P1Q2M238 152 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 LINC01545Q5VT33 79 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
SRPK1-204ENST00000373825 LINC00310P59036 64 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 GCSAMQ8N6F7 178 aa12.54□□□□□ -0.4
SRPK1-204ENST00000373825 MRPL35Q9NZE8 188 aaKnown RBP12.54□□□□□ -0.4
SRPK1-204ENST00000373825 FRMPD3Q5JV73 1810 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 LTAP01374 205 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 ATP5IP56385 69 aaPredicted RBP12.53□□□□□ -0.4
SRPK1-204ENST00000373825 TCTEX1D4Q5JR98 221 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 FCN3O75636 299 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 METRNQ9UJH8 293 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 FOXA2Q9Y261 457 aaPredicted RBP12.53□□□□□ -0.4
SRPK1-204ENST00000373825 A0A0U1RRA0 63 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 C2CD4DB7Z1M9 353 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 SRSF1Q07955 248 aaKnown RBP eCLIP12.53□□□□□ -0.41e-9■■□□□ 11.8
SRPK1-204ENST00000373825 TMEM240Q5SV17 173 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 C11orf1Q9H5F2 150 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
SRPK1-204ENST00000373825 IGHV3-66A0A0C4DH42 116 aa12.52□□□□□ -0.4
SRPK1-204ENST00000373825 MRPL20Q9BYC9 149 aaKnown RBP12.52□□□□□ -0.4
SRPK1-204ENST00000373825 HES7Q9BYE0 225 aa12.52□□□□□ -0.4
SRPK1-204ENST00000373825 PLXNA3P51805 1871 aa12.52□□□□□ -0.4
SRPK1-204ENST00000373825 APOBEC3AP31941 199 aaPredicted RBP12.52□□□□□ -0.4
SRPK1-204ENST00000373825 PMVKQ15126 192 aa12.52□□□□□ -0.4
SRPK1-204ENST00000373825 IGHV3-23P01764 117 aa12.52□□□□□ -0.41
SRPK1-204ENST00000373825 Q6ZR03 302 aa12.52□□□□□ -0.41
SRPK1-204ENST00000373825 Q8TAT8 98 aa12.52□□□□□ -0.41
SRPK1-204ENST00000373825 KIR2DL4Q99706 377 aa12.52□□□□□ -0.41
SRPK1-204ENST00000373825 IGKV3D-15A0A087WSY6 115 aa12.52□□□□□ -0.41
SRPK1-204ENST00000373825 IGKV3-15P01624 115 aa12.52□□□□□ -0.41
SRPK1-204ENST00000373825 PF4V1P10720 104 aa12.52□□□□□ -0.41
SRPK1-204ENST00000373825 NUP37Q8NFH4 326 aa12.52□□□□□ -0.41
SRPK1-204ENST00000373825 NDUFS7O75251 213 aa12.51□□□□□ -0.41
SRPK1-204ENST00000373825 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
SRPK1-204ENST00000373825 IGHV1OR15-9A0A0B4J2B8 117 aa12.51□□□□□ -0.41
SRPK1-204ENST00000373825 SLC25A20O43772 301 aa12.51□□□□□ -0.41
SRPK1-204ENST00000373825 NXPH1P58417 271 aa12.51□□□□□ -0.41
SRPK1-204ENST00000373825 PRB3Q04118 309 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms