RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RNASE4P34096 147 aaKnown RBP7.4□□□□□ -1.22
SMARCA1-202ENST00000371122 PRSS8Q16651 343 aa7.4□□□□□ -1.22
SMARCA1-202ENST00000371122 C15orf32Q32M92 178 aa7.4□□□□□ -1.22
SMARCA1-202ENST00000371122 CDPF1Q6NVV7 123 aa7.4□□□□□ -1.22
SMARCA1-202ENST00000371122 COL25A1Q9BXS0 654 aaPredicted RBP7.4□□□□□ -1.22
SMARCA1-202ENST00000371122 MAP1LC3AQ9H492 121 aa7.4□□□□□ -1.22
SMARCA1-202ENST00000371122 SRRM4A7MD48 611 aaKnown RBP7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 H0YJW9 148 aa7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 FOXL1Q12952 345 aa7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 LCNL1Q6ZST4 164 aa7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 PSG8Q9UQ74 426 aa7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 KLF2Q9Y5W3 355 aaPredicted RBP7.4□□□□□ -1.23
SMARCA1-202ENST00000371122 GAGE10A6NGK3 116 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 PIMREGQ9BSJ6 248 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 A0A0U1RRA0 63 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 A0A1W2PPI3 338 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 MBD3L4A6NDZ8 208 aaPredicted RBP7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 MBD3L3A6NE82 208 aaPredicted RBP7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 MBD3L5A6NJ08 208 aaPredicted RBP7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 THBDP07204 575 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 MBD3L2Q8NHZ7 208 aaPredicted RBP7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 BPESC1Q9GZL8 116 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 FAM215AQ9Y5M1 114 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 CENPEQ02224 2701 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 IGHG3P01860 377 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 TMEM170BQ5T4T1 132 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 RNASEH2CQ8TDP1 164 aaKnown RBP7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 EEF1AKMT3Q96AZ1 226 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 ZNF414Q96IQ9 312 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 JMJD8Q96S16 334 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 HIST1H4GQ99525 98 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 FOXC2Q99958 501 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 C19orf24Q9BVV8 132 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 CBY1Q9Y3M2 126 aa7.39□□□□□ -1.23
SMARCA1-202ENST00000371122 NDUFA3O95167 84 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 FAM106AQ4KMX7 169 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 DNLZQ5SXM8 178 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 FAM159AQ6UWV7 190 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 ITLN2Q8WWU7 325 aaPredicted RBP7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 DDB2Q92466 427 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 VKORC1Q9BQB6 163 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 SPRY2O43597 315 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 FER1L6-AS1Q8NA97 138 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 PRDM13Q9H4Q3 707 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 TRBV24-1A0A075B6N3 115 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 TRAV30A0A087WSZ9 112 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 IZUMO1RA6ND01 250 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 RNASE2P10153 161 aaKnown RBP7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 RIPPLY3P57055 190 aa7.38□□□□□ -1.23
SMARCA1-202ENST00000371122 G3V318 75 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 RUSC1-AS1Q66K80 236 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 VMO1Q7Z5L0 202 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 NIT1Q86X76 327 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 IGHV3-64A0A075B6Q5 118 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 A0A1W2PRE2 83 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 hDV102S1A0JD36 115 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 M0QZK8 103 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 TCRAP04437 139 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 TYMSP04818 313 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 ID1P41134 155 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 JOSD1Q15040 202 aaPredicted RBP7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 PARD6GQ9BYG4 376 aaPredicted RBP7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 SLC25A39Q9BZJ4 359 aaPredicted RBP7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 CDC42EP3Q9UKI2 254 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 SIGLEC9Q9Y336 463 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 CACNG7P62955 275 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 FLNBO75369 2602 aaKnown RBP7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 H3BUX3 64 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 J3QR89 54 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 LYL1P12980 280 aa7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 SSBP2P81877 361 aaPredicted RBP7.37□□□□□ -1.23
SMARCA1-202ENST00000371122 A0A1W2PS18 150 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 APOMO95445 188 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 ZNF688P0C7X2 276 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 PSG9Q00887 426 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 SLC25A48Q6ZT89 311 aaKnown RBP7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 ZNF664Q8N3J9 261 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 A6NDN8 102 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 CEACAM4O75871 244 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 TAS2R60P59551 318 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 WT1-ASQ06250 92 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 SAPCD1Q5SSQ6 148 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 UTF1Q5T230 341 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 ERVK11-1P61568 191 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 ERCC8Q13216 396 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 IL15RAQ13261 267 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 C17orf58Q2M2W7 97 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 RNF182Q8N6D2 247 aa7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 COL27A1Q8IZC6 1860 aaPredicted RBP7.36□□□□□ -1.23
SMARCA1-202ENST00000371122 MAP1AP78559 2803 aaPredicted RBP7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 IGLV3-9A0A075B6K5 115 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 DKK1O94907 266 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 CD7P09564 240 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 LINC00614P0C842 121 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 SFTPCP11686 197 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms