RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 C2orf88Q9BSF0 95 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 TRBV7-1A0A0A6YYK4 115 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 DKK1O94907 266 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 MLANAQ16655 118 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 C1orf194Q5T5A4 169 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 NUP35Q8NFH5 326 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 ZNF418Q8TF45 676 aaPredicted RBP9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 MS4A6AQ9H2W1 248 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 CYSLTR1Q9Y271 337 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 ZFHX2Q9C0A1 2572 aaPredicted RBP9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 K7ENP7 123 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 DPM2O94777 84 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 TOMM40O96008 361 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 PFN1P07737 140 aaKnown RBP9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 PDE6HQ13956 83 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 FBLN7Q53RD9 439 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 TMEM256Q8N2U0 113 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 B4DSR2 109 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 DLEU1O43261 78 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 LDLRAD2Q5SZI1 272 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 RNF166Q96A37 237 aaPredicted RBP9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 LINC01587Q99440 93 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 ALKBH7Q9BT30 221 aaPredicted RBP9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 NDUFA4L2Q9NRX3 87 aa9.62□□□□□ -0.87
DEPDC1-201ENST00000370966 A0A1B0GV72 72 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 ZNF138P52744 262 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 C10orf91Q5T1B1 145 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 ZNF562Q6V9R5 426 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 LINC00311Q8N616 119 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 NDUFS8O00217 210 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 PPIFP30405 207 aaKnown RBP9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 RPL15P61313 204 aaKnown RBP9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 C5orf30Q96GV9 206 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 SMPXQ9UHP9 88 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 IGKV2-40A0A087WW87 121 aaPredicted RBP9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 H3BRM9 83 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 IGKV2D-40P01614 121 aaPredicted RBP9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 GLMPQ8WWB7 406 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 TMEM101Q96IK0 257 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 MRPL16Q9NX20 251 aaKnown RBP9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 MRPS16Q9Y3D3 137 aaKnown RBP9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 SMAD7O15105 426 aaKnown RBP9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 GZMBP10144 247 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 PSG3Q16557 428 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 Q6ZSR3 168 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 LINC00527Q9UJ94 153 aa9.61□□□□□ -0.87
DEPDC1-201ENST00000370966 C15orf65H3BRN8 121 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 ACACBO00763 2458 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 IFI27P40305 119 aaPredicted RBP9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 C17orf58Q2M2W7 97 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 TEX36Q5VZQ5 186 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 USMG5Q96IX5 58 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 SHANK2-AS3Q9BTD1 123 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 PLXNB3Q9ULL4 1909 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 PSMB11A5LHX3 300 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 LHFPL4Q7Z7J7 247 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 RPRMLQ8N4K4 120 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 SSC4DQ8WTU2 575 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 VCX2Q9H322 139 aa9.6□□□□□ -0.87
DEPDC1-201ENST00000370966 PLCE1Q9P212 2302 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 NDUFA3O95167 84 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 ZNF329Q86UD4 541 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 LYPD6Q86Y78 171 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 MRAP2Q96G30 205 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 LINC00477Q96M19 166 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 A6NNC1 897 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 POU2AF1Q16633 256 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 TMEM219Q86XT9 240 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 KIR3DL3Q8N743 410 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 CRIM1Q9NZV1 1036 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 SPCS1Q9Y6A9 102 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 MUC6Q6W4X9 2439 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 KIAA1671Q9BY89 1806 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 FAM231BA6NCW3 169 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 LCN12Q6JVE5 192 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 FAM208BQ5VWN6 2430 aa9.59□□□□□ -0.87
DEPDC1-201ENST00000370966 H3BUX3 64 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 GFRA4Q9GZZ7 299 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 D6R8Y8 96 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 LOXP28300 417 aaPredicted RBP9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 SEC11AP67812 179 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 Q0VG73 95 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 PTPRQQ9UMZ3 2332 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 TYMSP04818 313 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 ZNF726P1Q15940 193 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 PIP4P1Q86T03 277 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 Q86TA4 180 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 OR9G4Q8NGQ1 327 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 FAM215AQ9Y5M1 114 aa9.58□□□□□ -0.88
DEPDC1-201ENST00000370966 LY6HO94772 140 aa9.57□□□□□ -0.88
DEPDC1-201ENST00000370966 IGHV2-70P01814 119 aa9.57□□□□□ -0.88
DEPDC1-201ENST00000370966 C3orf79P0CE67 100 aa9.57□□□□□ -0.88
DEPDC1-201ENST00000370966 CT83Q5H943 113 aa9.57□□□□□ -0.88
DEPDC1-201ENST00000370966 FAM223BA6NKX1 122 aa9.57□□□□□ -0.88
DEPDC1-201ENST00000370966 IGKCP01834 107 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms