RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 TMEM11P17152 192 aa16.48■□□□□ 0.23
SOX3-201ENST00000370536 EBI3Q14213 229 aa16.48■□□□□ 0.23
SOX3-201ENST00000370536 ZNF562Q6V9R5 426 aa16.48■□□□□ 0.23
SOX3-201ENST00000370536 ARPC1AQ92747 370 aa16.48■□□□□ 0.23
SOX3-201ENST00000370536 S4R3C0 116 aa16.48■□□□□ 0.23
SOX3-201ENST00000370536 H3BTX0 84 aa16.47■□□□□ 0.23
SOX3-201ENST00000370536 IGHV4-39P01824 125 aa16.47■□□□□ 0.23
SOX3-201ENST00000370536 KIAA1644Q3SXP7 199 aa16.47■□□□□ 0.23
SOX3-201ENST00000370536 CBY1Q9Y3M2 126 aa16.47■□□□□ 0.23
SOX3-201ENST00000370536 CSMD1Q96PZ7 3565 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 BMPR1BO00238 502 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 PMCHP20382 165 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 RCHY1Q96PM5 261 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 SLC25A5P05141 298 aaKnown RBP16.46■□□□□ 0.23
SOX3-201ENST00000370536 SRIP30626 198 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 UBE2E1P51965 193 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 FAM120AOSQ5T036 256 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 AJUBAQ96IF1 538 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 FANCD2OSQ96PS1 177 aa16.46■□□□□ 0.23
SOX3-201ENST00000370536 PGPA6NDG6 321 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 FAM231DQ6ZW35 169 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 SLC25A39Q9BZJ4 359 aaPredicted RBP16.45■□□□□ 0.22
SOX3-201ENST00000370536 EPDR1Q9UM22 224 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 IZUMO1RA6ND01 250 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 NPIPB5A8MRT5 1133 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 IGLC2P0DOY2 106 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 IGLC3P0DOY3 106 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 TCL1AP56279 114 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 CHRDL1Q9BU40 450 aa16.45■□□□□ 0.22
SOX3-201ENST00000370536 SVEP1Q4LDE5 3571 aa16.44■□□□□ 0.22
SOX3-201ENST00000370536 APCSP02743 223 aa16.44■□□□□ 0.22
SOX3-201ENST00000370536 C3orf79P0CE67 100 aa16.44■□□□□ 0.22
SOX3-201ENST00000370536 SLC35B1P78383 322 aa16.44■□□□□ 0.22
SOX3-201ENST00000370536 NIT1Q86X76 327 aa16.44■□□□□ 0.22
SOX3-201ENST00000370536 KLHDC1Q8N7A1 406 aa16.44■□□□□ 0.22
SOX3-201ENST00000370536 SERTAD4Q9NUC0 356 aa16.44■□□□□ 0.22
SOX3-201ENST00000370536 MRPL27Q9P0M9 148 aaKnown RBP16.44■□□□□ 0.22
SOX3-201ENST00000370536 CFAP46Q8IYW2 2715 aa16.44■□□□□ 0.22
SOX3-201ENST00000370536 IGLV11-55A0A075B6I3 123 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 SAA4P35542 130 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 MRPL54Q6P161 138 aaKnown RBP16.43■□□□□ 0.22
SOX3-201ENST00000370536 RASL11AQ6T310 242 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 TSKUQ8WUA8 353 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 SMIM12Q96EX1 92 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 ZNF331Q9NQX6 463 aaPredicted RBP16.43■□□□□ 0.22
SOX3-201ENST00000370536 RPH3ALQ9UNE2 315 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 TFPI2P48307 235 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 TTC9CQ8N5M4 171 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 BORCS7Q96B45 105 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 TXN2Q99757 166 aa16.43■□□□□ 0.22
SOX3-201ENST00000370536 SPTAN1Q13813 2472 aaKnown RBP16.42■□□□□ 0.22
SOX3-201ENST00000370536 Q8N9W7 124 aa16.42■□□□□ 0.22
SOX3-201ENST00000370536 WIPF2Q8TF74 440 aaPredicted RBP16.42■□□□□ 0.22
SOX3-201ENST00000370536 SGK494Q96LW2 274 aa16.42■□□□□ 0.22
SOX3-201ENST00000370536 FAM106CPP0CH98 169 aa16.42■□□□□ 0.22
SOX3-201ENST00000370536 HNRNPA3P51991 378 aaKnown RBP16.42■□□□□ 0.22
SOX3-201ENST00000370536 UBE2G1P62253 170 aa16.42■□□□□ 0.22
SOX3-201ENST00000370536 DMRTA1Q5VZB9 504 aa16.42■□□□□ 0.22
SOX3-201ENST00000370536 Q6ZN92 141 aa16.42■□□□□ 0.22
SOX3-201ENST00000370536 Q9H3A6 140 aa16.42■□□□□ 0.22
SOX3-201ENST00000370536 IGHV7-81A0A0B4J1V7 117 aa16.41■□□□□ 0.22
SOX3-201ENST00000370536 TOMM40O96008 361 aa16.41■□□□□ 0.22
SOX3-201ENST00000370536 EGR2P11161 476 aaPredicted RBP16.41■□□□□ 0.22
SOX3-201ENST00000370536 ZNF491Q8N8L2 437 aa16.41■□□□□ 0.22
SOX3-201ENST00000370536 TMEM14CQ9P0S9 112 aa16.4■□□□□ 0.22
SOX3-201ENST00000370536 LAMTOR2Q9Y2Q5 125 aa16.4■□□□□ 0.22
SOX3-201ENST00000370536 GNG7O60262 68 aa16.4■□□□□ 0.22
SOX3-201ENST00000370536 MFAP4P55083 255 aa16.4■□□□□ 0.22
SOX3-201ENST00000370536 PMCHL1Q16048 86 aa16.4■□□□□ 0.22
SOX3-201ENST00000370536 GRAMD2BQ96HH9 432 aa16.4■□□□□ 0.22
SOX3-201ENST00000370536 COL12A1Q99715 3063 aa16.4■□□□□ 0.22
SOX3-201ENST00000370536 CA1P00915 261 aaPredicted RBP16.39■□□□□ 0.21
SOX3-201ENST00000370536 IL4P05112 153 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 FAM19A2Q8N3H0 131 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 STPG4Q8N801 248 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 C5orf17Q8NAS9 161 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 C18orf32Q8TCD1 76 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 TMEM190Q8WZ59 177 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 RNF125Q96EQ8 232 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 CCL19Q99731 98 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 SHANK2-AS3Q9BTD1 123 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 KLF12Q9Y4X4 402 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 F8W735 103 aaPredicted RBP16.39■□□□□ 0.21
SOX3-201ENST00000370536 H3BRN7 92 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 HIST1H1EP10412 219 aaKnown RBP16.39■□□□□ 0.21
SOX3-201ENST00000370536 FAM168AQ92567 244 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 MBD6Q96DN6 1003 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 C1RLQ9NZP8 487 aa16.39■□□□□ 0.21
SOX3-201ENST00000370536 NPFFO15130 113 aa16.38■□□□□ 0.21
SOX3-201ENST00000370536 OR2J3O76001 311 aa16.38■□□□□ 0.21
SOX3-201ENST00000370536 NDUFB8O95169 186 aa16.38■□□□□ 0.21
SOX3-201ENST00000370536 IGHV3-23P01764 117 aa16.38■□□□□ 0.21
SOX3-201ENST00000370536 PRR27Q6MZM9 219 aa16.38■□□□□ 0.21
SOX3-201ENST00000370536 IGSF10Q6WRI0 2623 aa16.38■□□□□ 0.21
SOX3-201ENST00000370536 NTF3P20783 257 aa16.37■□□□□ 0.21
SOX3-201ENST00000370536 SLAQ13239 276 aa16.37■□□□□ 0.21
SOX3-201ENST00000370536 Q56UQ5 140 aa16.37■□□□□ 0.21
SOX3-201ENST00000370536 FMC1Q96HJ9 113 aa16.37■□□□□ 0.21
SOX3-201ENST00000370536 TRAV30A0A087WSZ9 112 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms