RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 FA2HQ7L5A8 372 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 NEGR1Q7Z3B1 354 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 BOD1L2Q8IYS8 172 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 RPRMLQ8N4K4 120 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 C9orf106Q8NAJ2 232 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 MCRIP2Q9BUT9 160 aaKnown RBP13.92□□□□□ -0.18
CHTOP-203ENST00000368690 RPH3ALQ9UNE2 315 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 HEATR1Q9H583 2144 aaKnown RBP13.92□□□□□ -0.18
CHTOP-203ENST00000368690 SAP30O75446 220 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 LGALS9BQ3B8N2 356 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 LGALS9CQ6DKI2 356 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 DUX4L9Q6RFH8 374 aaPredicted RBP13.92□□□□□ -0.18
CHTOP-203ENST00000368690 BHLHA15Q7RTS1 189 aaPredicted RBP13.92□□□□□ -0.18
CHTOP-203ENST00000368690 OR5A1Q8NGJ0 315 aa13.92□□□□□ -0.18
CHTOP-203ENST00000368690 IGLV3-9A0A075B6K5 115 aa13.91□□□□□ -0.18
CHTOP-203ENST00000368690 GLRXP35754 106 aa13.91□□□□□ -0.18
CHTOP-203ENST00000368690 FAM201AQ5SY85 155 aa13.91□□□□□ -0.18
CHTOP-203ENST00000368690 Q6AWC8 147 aa13.91□□□□□ -0.18
CHTOP-203ENST00000368690 OR4X2Q8NGF9 303 aa13.91□□□□□ -0.18
CHTOP-203ENST00000368690 C8orf46Q8TAG6 207 aa13.91□□□□□ -0.18
CHTOP-203ENST00000368690 TMEM14CQ9P0S9 112 aa13.91□□□□□ -0.18
CHTOP-203ENST00000368690 PRR14LQ5THK1 2151 aa13.91□□□□□ -0.18
CHTOP-203ENST00000368690 H0Y8G0 127 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 SMIM17P0DL12 118 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 C3orf36Q3SXR2 165 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 TMEM116Q8NCL8 245 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 RABAC1Q9UI14 185 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 SPRY3O43610 288 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 CIDEAO60543 219 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 IGLV2-11P01706 119 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 Q8NA96 180 aa13.9□□□□□ -0.18
CHTOP-203ENST00000368690 RAI1Q7Z5J4 1906 aaPredicted RBP13.9□□□□□ -0.18
CHTOP-203ENST00000368690 IGLV2-23P01705 113 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 MEF2CQ06413 473 aaPredicted RBP13.89□□□□□ -0.19
CHTOP-203ENST00000368690 OR2K2Q8NGT1 345 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 PRSS3P2Q8NHM4 247 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 JMJD8Q96S16 334 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 ZNRD1Q9P1U0 126 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 TLN1Q9Y490 2541 aaKnown RBP13.89□□□□□ -0.19
CHTOP-203ENST00000368690 NCR2O95944 276 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 CSN3P07498 182 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 APOBEC3AP31941 199 aaPredicted RBP13.89□□□□□ -0.19
CHTOP-203ENST00000368690 TEX36Q5VZQ5 186 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 ZNF493Q6ZR52 646 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 CCL13Q99616 98 aa13.89□□□□□ -0.19
CHTOP-203ENST00000368690 SMAD7O15105 426 aaKnown RBP13.88□□□□□ -0.19
CHTOP-203ENST00000368690 FOXE3Q13461 319 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 CIARTQ8N365 385 aaPredicted RBP13.88□□□□□ -0.19
CHTOP-203ENST00000368690 C8orf31Q8N9H6 132 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 CACNA1AO00555 2505 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 A0A0G2JLM5 398 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 A0A1W2PPI3 338 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 A1L4Q6 167 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 KIR3DS1Q14943 382 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 PRR30Q53SZ7 412 aaPredicted RBP13.88□□□□□ -0.19
CHTOP-203ENST00000368690 C10orf55Q5SWW7 151 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 FAM216BQ8N7L0 139 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 PROCRQ9UNN8 238 aa13.88□□□□□ -0.19
CHTOP-203ENST00000368690 IGHV3-48P01763 117 aa13.87□□□□□ -0.19
CHTOP-203ENST00000368690 VMA21Q3ZAQ7 101 aa13.87□□□□□ -0.19
CHTOP-203ENST00000368690 PSMG4Q5JS54 123 aa13.87□□□□□ -0.19
CHTOP-203ENST00000368690 ADAMTSL5Q6ZMM2 481 aa13.87□□□□□ -0.19
CHTOP-203ENST00000368690 LINC00311Q8N616 119 aa13.87□□□□□ -0.19
CHTOP-203ENST00000368690 TMEM186Q96B77 213 aa13.87□□□□□ -0.19
CHTOP-203ENST00000368690 JKAMPQ9P055 326 aa13.87□□□□□ -0.19
CHTOP-203ENST00000368690 U3KQK5 164 aa13.87□□□□□ -0.19
CHTOP-203ENST00000368690 A0A096LNJ9 63 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 H3BUT2 72 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 ARMS2P0C7Q2 107 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 RIPPLY3P57055 190 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 TMEM75Q8N9X5 138 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 SH3BGRL2Q9UJC5 107 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 HIGD1AQ9Y241 93 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 SPTA1P02549 2419 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 TNFAIP6P98066 277 aaPredicted RBP13.86□□□□□ -0.19
CHTOP-203ENST00000368690 VHLLQ6RSH7 139 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 NPFFR1Q9GZQ6 430 aa13.86□□□□□ -0.19
CHTOP-203ENST00000368690 SNAI2O43623 268 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 UQCRFS1P47985 274 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 GFRALQ6UXV0 394 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 PRNTQ86SH4 94 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 A0A1W2PPM0 123 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 ZNF785A8K8V0 405 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 CT45A10P0DMU9 189 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 C1orf185Q5T7R7 199 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 FAM57AQ8TBR7 257 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 PIFOQ8TCI5 191 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
CHTOP-203ENST00000368690 FAM215AQ9Y5M1 114 aa13.85□□□□□ -0.19
CHTOP-203ENST00000368690 IGHV1-46P01743 117 aa13.84□□□□□ -0.19
CHTOP-203ENST00000368690 LGALS7P47929 136 aa13.84□□□□□ -0.19
CHTOP-203ENST00000368690 TIMM23BQ5SRD1 257 aa13.84□□□□□ -0.19
CHTOP-203ENST00000368690 GOLT1AQ6ZVE7 132 aa13.84□□□□□ -0.19
CHTOP-203ENST00000368690 SEM1Q6ZVN7 128 aa13.84□□□□□ -0.19
CHTOP-203ENST00000368690 DEFB108BQ8NET1 73 aa13.84□□□□□ -0.19
CHTOP-203ENST00000368690 INTS1Q8N201 2190 aaKnown RBP13.84□□□□□ -0.19
CHTOP-203ENST00000368690 TRAV8-1A0A0A6YYK1 113 aa13.83□□□□□ -0.19
CHTOP-203ENST00000368690 MBD3L4A6NDZ8 208 aaPredicted RBP13.83□□□□□ -0.19
CHTOP-203ENST00000368690 MBD3L3A6NE82 208 aaPredicted RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms