RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ATP6V0E1O15342 81 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 DEFB104AQ8WTQ1 72 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 ST6GALNAC6Q969X2 333 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 ZGRF1Q86YA3 2104 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 A0A087WWC5 75 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 GRNP28799 593 aaKnown RBP15.07■□□□□ 0
CLIP2-202ENST00000361545 PRR31Q5SQ13 230 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 IGHV3-53P01767 116 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 GATA4P43694 442 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 CACNG7P62955 275 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 Q8TCH9 128 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 TRGV1A0A0A0MS02 117 aa15.07■□□□□ 0
CLIP2-202ENST00000361545 RPP25LQ8N5L8 163 aaKnown RBP15.07■□□□□ 0
CLIP2-202ENST00000361545 NOTCH2Q04721 2471 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 IGHV2-70DA0A0C4DH43 119 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 Q6ZRM9 215 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 C9orf139Q6ZV77 190 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 WDR86Q86TI4 376 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 OR9G4Q8NGQ1 327 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 HELZP42694 1942 aaKnown RBP15.06■□□□□ 0
CLIP2-202ENST00000361545 TRAV9-1A0A075B6T8 112 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 CRPP02741 224 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 BEND2Q8NDZ0 799 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 IGKV1-6A0A0C4DH72 117 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 RNASE2P10153 161 aaKnown RBP15.06■□□□□ 0
CLIP2-202ENST00000361545 UBE2DNLQ8IWF7 75 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 C14orf144Q96I85 54 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 ANAPC1Q9H1A4 1944 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 IL17RELQ6ZVW7 336 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 PMCHL2Q9BQD1 86 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 AGMATQ9BSE5 352 aa15.06■□□□□ 0
CLIP2-202ENST00000361545 CD5P06127 495 aa15.05■□□□□ 0
CLIP2-202ENST00000361545 Q6ZS49 121 aa15.05■□□□□ 0
CLIP2-202ENST00000361545 A0A1W2PPI3 338 aa15.05■□□□□ -0
CLIP2-202ENST00000361545 DNAL4O96015 105 aa15.05■□□□□ -0
CLIP2-202ENST00000361545 RSPO3Q9BXY4 272 aaPredicted RBP15.05■□□□□ -0
CLIP2-202ENST00000361545 C15orf62A8K5M9 175 aa15.05■□□□□ -0
CLIP2-202ENST00000361545 NUDT10Q8NFP7 164 aa15.05■□□□□ -0
CLIP2-202ENST00000361545 NUDT11Q96G61 164 aa15.05■□□□□ -0
CLIP2-202ENST00000361545 GBF1Q92538 1859 aa15.05■□□□□ -0
CLIP2-202ENST00000361545 RNF166Q96A37 237 aaPredicted RBP15.05■□□□□ -0
CLIP2-202ENST00000361545 G3V318 75 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 LOXP28300 417 aaPredicted RBP15.04■□□□□ -0
CLIP2-202ENST00000361545 ZNF138P52744 262 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 ARFGEF3Q5TH69 2177 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 TCRAP04437 139 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 ADMP35318 185 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 ZNF562Q6V9R5 426 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 DAZ1Q9NQZ3 744 aaKnown RBP15.04■□□□□ -0
CLIP2-202ENST00000361545 CFHR2P36980 270 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 FRMPD3Q5JV73 1810 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 SERF1AO75920 110 aa15.04■□□□□ -0
CLIP2-202ENST00000361545 GTF3C1Q12789 2109 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 LCN12Q6JVE5 192 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 F2Z2F3 143 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 NDUFS7O75251 213 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 IGLV1-44P01699 117 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 TSKUQ8WUA8 353 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 HEATR5AQ86XA9 2040 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 SRSF1Q07955 248 aaKnown RBP eCLIP15.03■□□□□ -0
CLIP2-202ENST00000361545 DERL1Q9BUN8 251 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 FGF16O43320 207 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 CYSLTR1Q9Y271 337 aa15.03■□□□□ -0
CLIP2-202ENST00000361545 TRAV8-1A0A0A6YYK1 113 aa15.02■□□□□ -0
CLIP2-202ENST00000361545 CD28P10747 220 aa15.02■□□□□ -0
CLIP2-202ENST00000361545 LMO1P25800 156 aa15.02■□□□□ -0
CLIP2-202ENST00000361545 CYTL1Q9NRR1 136 aa15.02■□□□□ -0
CLIP2-202ENST00000361545 IGLV3-9A0A075B6K5 115 aa15.02■□□□□ -0
CLIP2-202ENST00000361545 TOMM40O96008 361 aa15.02■□□□□ -0
CLIP2-202ENST00000361545 VGLL1Q99990 258 aa15.02■□□□□ -0
CLIP2-202ENST00000361545 A0A087WX48 190 aa15.02□□□□□ -0.01
CLIP2-202ENST00000361545 DTX2Q86UW9 622 aa15.02□□□□□ -0.01
CLIP2-202ENST00000361545 TTC9CQ8N5M4 171 aa15.01□□□□□ -0.01
CLIP2-202ENST00000361545 VOPP1Q96AW1 172 aa15.01□□□□□ -0.01
CLIP2-202ENST00000361545 PRADC1Q9BSG0 188 aa15.01□□□□□ -0.01
CLIP2-202ENST00000361545 SLX1AQ9BQ83 275 aa15.01□□□□□ -0.01
CLIP2-202ENST00000361545 TMEM249Q2WGJ8 235 aa15.01□□□□□ -0.01
CLIP2-202ENST00000361545 DEFB131AP59861 70 aa15.01□□□□□ -0.01
CLIP2-202ENST00000361545 NCR2O95944 276 aa15□□□□□ -0.01
CLIP2-202ENST00000361545 C1orf122Q6ZSJ8 110 aa15□□□□□ -0.01
CLIP2-202ENST00000361545 ADARB2-AS1A8MUL3 147 aa15□□□□□ -0.01
CLIP2-202ENST00000361545 PPBPP02775 128 aa15□□□□□ -0.01
CLIP2-202ENST00000361545 ZNF124Q15973 351 aa15□□□□□ -0.01
CLIP2-202ENST00000361545 REG4Q9BYZ8 158 aa15□□□□□ -0.01
CLIP2-202ENST00000361545 SPOCK3Q9BQ16 436 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 NDUFB8O95169 186 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 C17orf58Q2M2W7 97 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 NXT2Q9NPJ8 142 aaKnown RBP14.99□□□□□ -0.01
CLIP2-202ENST00000361545 SCGB1A1P11684 91 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 LINC00477Q96M19 166 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 MRPL16Q9NX20 251 aaKnown RBP14.99□□□□□ -0.01
CLIP2-202ENST00000361545 ITGB1BP1O14713 200 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 HBDP02042 147 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 LINC00614P0C842 121 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 RSPO1Q2MKA7 263 aaPredicted RBP14.99□□□□□ -0.01
CLIP2-202ENST00000361545 LYZL1Q6UWQ5 148 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 NRN1Q9NPD7 142 aa14.99□□□□□ -0.01
CLIP2-202ENST00000361545 MYLKQ15746 1914 aa14.98□□□□□ -0.01
CLIP2-202ENST00000361545 APOMO95445 188 aa14.98□□□□□ -0.01
CLIP2-202ENST00000361545 TRBV7-9A0A0J9YWB2 115 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms