RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SSC4DQ8WTU2 575 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 TNFRSF14Q92956 283 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 LMO1P25800 156 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 ZNF562Q6V9R5 426 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 SPACA3Q8IXA5 215 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 TNFRSF18Q9Y5U5 241 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 KLF5Q13887 457 aaPredicted RBP11.34□□□□□ -0.59
SMC5-201ENST00000361138 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 TRAV21A0A0B4J279 112 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 PRTN3P24158 256 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 ZC2HC1BQ5TFG8 222 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 IGKV3-20P01619 116 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 TSSC4Q9Y5U2 329 aaPredicted RBP11.34□□□□□ -0.59
SMC5-201ENST00000361138 C9orf172C9J069 976 aa11.33□□□□□ -0.6
SMC5-201ENST00000361138 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
SMC5-201ENST00000361138 TDRG1Q3Y452 100 aa11.33□□□□□ -0.6
SMC5-201ENST00000361138 A0A1W2PPM0 123 aa11.33□□□□□ -0.6
SMC5-201ENST00000361138 CFHR2P36980 270 aa11.33□□□□□ -0.6
SMC5-201ENST00000361138 SUMO2P61956 95 aaKnown RBP11.33□□□□□ -0.6
SMC5-201ENST00000361138 TMEM155Q4W5P6 130 aa11.33□□□□□ -0.6
SMC5-201ENST00000361138 PRSS57Q6UWY2 283 aa11.33□□□□□ -0.6
SMC5-201ENST00000361138 COL4A3Q01955 1670 aa11.33□□□□□ -0.6
SMC5-201ENST00000361138 ZCCHC24Q8N2G6 241 aaKnown RBP11.32□□□□□ -0.6
SMC5-201ENST00000361138 PSMB11A5LHX3 300 aa11.32□□□□□ -0.6
SMC5-201ENST00000361138 WIPF2Q8TF74 440 aaPredicted RBP11.32□□□□□ -0.6
SMC5-201ENST00000361138 F8W1H4 67 aa11.32□□□□□ -0.6
SMC5-201ENST00000361138 IGHV2-70DA0A0C4DH43 119 aa11.32□□□□□ -0.6
SMC5-201ENST00000361138 CEACAM8P31997 349 aaPredicted RBP11.32□□□□□ -0.6
SMC5-201ENST00000361138 DDB2Q92466 427 aa11.32□□□□□ -0.6
SMC5-201ENST00000361138 RNASE1P07998 156 aaKnown RBP11.32□□□□□ -0.6
SMC5-201ENST00000361138 ASPHD1Q5U4P2 390 aa11.32□□□□□ -0.6
SMC5-201ENST00000361138 WDR86Q86TI4 376 aa11.32□□□□□ -0.6
SMC5-201ENST00000361138 YAE1D1Q9NRH1 226 aa11.32□□□□□ -0.6
SMC5-201ENST00000361138 TIMM23O14925 209 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 WNT2P09544 360 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 LY6EQ16553 131 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 SEC16AO15027 2179 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 ZNF883P0CG24 379 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 LGALS9CQ6DKI2 356 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 IGHV1-8P0DP01 117 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 PLSCR4Q9NRQ2 329 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 TMEM213A2RRL7 107 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 LINC01549A6NIU2 74 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 Q8TAT8 98 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 TRAV40A0A0B4J280 105 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 FAM57AQ8TBR7 257 aa11.31□□□□□ -0.6
SMC5-201ENST00000361138 SSBP2P81877 361 aaPredicted RBP11.3□□□□□ -0.6
SMC5-201ENST00000361138 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 DUX5Q96PT3 197 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 ATXN8Q156A1 80 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 TNFRSF6BO95407 300 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 RHOGP84095 191 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 LINC01560Q8TB33 94 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 PROK2Q9HC23 129 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
SMC5-201ENST00000361138 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
SMC5-201ENST00000361138 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 C8orf49Q96NF6 230 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
SMC5-201ENST00000361138 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 SHANK2-AS3Q9BTD1 123 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 ZNF106Q9H2Y7 1883 aaKnown RBP11.29□□□□□ -0.6
SMC5-201ENST00000361138 CD7P09564 240 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 DEFB125Q8N687 156 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 SIVA1O15304 175 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 LCNL1Q6ZST4 164 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
SMC5-201ENST00000361138 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 TMEM238C9JI98 176 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 ARHGEF17Q96PE2 2063 aaPredicted RBP11.28□□□□□ -0.6
SMC5-201ENST00000361138 ZNF503-AS2A6NEH8 195 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 Q8NFD4 153 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 SIGLEC9Q9Y336 463 aa11.28□□□□□ -0.6
SMC5-201ENST00000361138 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.6
SMC5-201ENST00000361138 AZU1P20160 251 aa11.27□□□□□ -0.6
SMC5-201ENST00000361138 CEND1Q8N111 149 aa11.27□□□□□ -0.6
SMC5-201ENST00000361138 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 M0R2P5 195 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 PRR20EP86478 221 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 PRR20CP86479 221 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 PRR20DP86480 221 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 PRR20BP86481 221 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 PRR20AP86496 221 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 Q6ZSR3 168 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 RNF5Q99942 180 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 FANCMQ8IYD8 2048 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 C15orf65H3BRN8 121 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 MOB4Q9Y3A3 225 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms