RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ZNF207O43670 478 aaKnown RBP11.96□□□□□ -0.49
CTSA-202ENST00000354880 CRYBB3P26998 211 aa11.96□□□□□ -0.49
CTSA-202ENST00000354880 C18orf65Q6ZTR6 163 aa11.96□□□□□ -0.49
CTSA-202ENST00000354880 C4orf3Q8WVX3 66 aa11.96□□□□□ -0.49
CTSA-202ENST00000354880 WFDC12Q8WWY7 111 aa11.96□□□□□ -0.49
CTSA-202ENST00000354880 LINC00052Q96N35 136 aa11.96□□□□□ -0.49
CTSA-202ENST00000354880 YTHDF2Q9Y5A9 579 aaKnown RBP11.96□□□□□ -0.49
CTSA-202ENST00000354880 JMJD1CQ15652 2540 aa11.96□□□□□ -0.5
CTSA-202ENST00000354880 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 A0A087WW49 117 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 C11orf94C9JXX5 98 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 BUB3O43684 328 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 SFTA3P0C7M3 94 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 PROK1P58294 105 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 CD81P60033 236 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 TXNDC17Q9BRA2 123 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
CTSA-202ENST00000354880 SNRPCP09234 159 aaKnown RBP11.95□□□□□ -0.5
CTSA-202ENST00000354880 NBEAP1P0C6P0 100 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 HIST1H1EP10412 219 aaKnown RBP11.95□□□□□ -0.5
CTSA-202ENST00000354880 CD28P10747 220 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 ZP3P21754 424 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 OR8I2Q8N0Y5 310 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 C11orf44Q8N8P7 122 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 OR4F17Q8NGA8 305 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 OR4F4Q96R69 305 aa11.95□□□□□ -0.5
CTSA-202ENST00000354880 MRPS12O15235 138 aaKnown RBP11.94□□□□□ -0.5
CTSA-202ENST00000354880 RPL7P18124 248 aaKnown RBP11.94□□□□□ -0.5
CTSA-202ENST00000354880 ATP5G3P48201 142 aa11.94□□□□□ -0.5
CTSA-202ENST00000354880 KLHL30-AS1Q8NEE0 82 aa11.94□□□□□ -0.5
CTSA-202ENST00000354880 BLNKQ8WV28 456 aa11.94□□□□□ -0.5
CTSA-202ENST00000354880 DAZ1Q9NQZ3 744 aaKnown RBP11.94□□□□□ -0.5
CTSA-202ENST00000354880 U3KQE9 123 aa11.94□□□□□ -0.5
CTSA-202ENST00000354880 F8W036 122 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 APOHP02749 345 aaPredicted RBP11.93□□□□□ -0.5
CTSA-202ENST00000354880 IGLC2P0DOY2 106 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 DEFB136Q30KP8 78 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 C1orf194Q5T5A4 169 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 CYB561D1Q8N8Q1 229 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 IGHV3OR16-13A0A075B7E8 117 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 IGHV3-74A0A0B4J1X5 117 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 IGHV3-66A0A0C4DH42 116 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 H3BQ15 152 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 NDUFS6O75380 124 aaKnown RBP11.93□□□□□ -0.5
CTSA-202ENST00000354880 ADCYAP1P18509 176 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 HOXD3P31249 432 aaPredicted RBP11.93□□□□□ -0.5
CTSA-202ENST00000354880 CEBPGP53567 150 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 HIST2H2BDQ6DRA6 164 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 OR11H1Q8NG94 326 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 CITED2Q99967 270 aaPredicted RBP11.93□□□□□ -0.5
CTSA-202ENST00000354880 SEC11CQ9BY50 192 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 NKX6-2Q9C056 277 aaPredicted RBP11.93□□□□□ -0.5
CTSA-202ENST00000354880 ZNF586Q9NXT0 402 aa11.93□□□□□ -0.5
CTSA-202ENST00000354880 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
CTSA-202ENST00000354880 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 A0A1B0GUS0 222 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 LINC01619G3V211 115 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 TMEM250H0YL14 139 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 K7EMT4 169 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 PDE6DO43924 150 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 TM4SF20Q53R12 229 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 GPR82Q96P67 336 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 UFC1Q9Y3C8 167 aa11.92□□□□□ -0.5
CTSA-202ENST00000354880 GGTLC3B5MD39 225 aa11.91□□□□□ -0.5
CTSA-202ENST00000354880 H3BTX0 84 aa11.91□□□□□ -0.5
CTSA-202ENST00000354880 RANP62826 216 aaKnown RBP11.91□□□□□ -0.5
CTSA-202ENST00000354880 SUMO1P63165 101 aaKnown RBP11.91□□□□□ -0.5
CTSA-202ENST00000354880 SOHLH1Q5JUK2 328 aa11.91□□□□□ -0.5
CTSA-202ENST00000354880 CCDC28AQ8IWP9 274 aa11.91□□□□□ -0.5
CTSA-202ENST00000354880 DPF1Q92782 380 aa11.91□□□□□ -0.5
CTSA-202ENST00000354880 TRBV19A0A075B6N1 114 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 A0A1W2PS18 150 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 LGALS9O00182 355 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 SYNJ2BPP57105 145 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 C10orf91Q5T1B1 145 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 C16orf54Q6UWD8 224 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 REC114Q7Z4M0 266 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 OR1N2Q8NGR9 330 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 IGHV7-4-1A0A0J9YVY3 117 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 A0A1W2PRX2 142 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 F6UZH7 168 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 GALR1P47211 349 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 KLF5Q13887 457 aaPredicted RBP11.9□□□□□ -0.5
CTSA-202ENST00000354880 PDE6HQ13956 83 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 C1QL4Q86Z23 238 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 C17orf77Q96MU5 243 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 SMAD5-AS1Q9Y6J3 95 aa11.9□□□□□ -0.5
CTSA-202ENST00000354880 A8MWP6 167 aa11.89□□□□□ -0.51
CTSA-202ENST00000354880 APOC3P02656 99 aa11.89□□□□□ -0.51
CTSA-202ENST00000354880 ATF4P18848 351 aaPredicted RBP11.89□□□□□ -0.51
CTSA-202ENST00000354880 MYCNOSP40205 109 aa11.89□□□□□ -0.51
CTSA-202ENST00000354880 SLURP1P55000 103 aa11.89□□□□□ -0.51
CTSA-202ENST00000354880 FAM90A2PQ658T7 463 aa11.89□□□□□ -0.51
CTSA-202ENST00000354880 DUX3Q96PT4 197 aa11.89□□□□□ -0.51
CTSA-202ENST00000354880 CARHSP1Q9Y2V2 147 aaKnown RBP11.89□□□□□ -0.51
CTSA-202ENST00000354880 SCO2A0A1W2PP80 73 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms