RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 THAP8Q8NA92 274 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 FRZBQ92765 325 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 SRRQ9GZT4 340 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 MAGT1Q9H0U3 335 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 IGKV1OR2-108A0A075B7D4 117 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 J3QL48 77 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 NUDT3O95989 172 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 IGKV3-20P01619 116 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 PSMB3P49720 205 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 SPANXN5Q5MJ07 72 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 SAMD13Q5VXD3 122 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 TRIQKQ629K1 86 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 LINC00052Q96N35 136 aa11.13□□□□□ -0.63
DDX55-202ENST00000354291 STRAPQ9Y3F4 350 aaKnown RBP11.13□□□□□ -0.63
DDX55-202ENST00000354291 C9orf170A2RU37 121 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 PRSS46E5RG02 174 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 NDUFB6O95139 128 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 S100A7P31151 101 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 CCL18P55774 89 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 SPATA31B1PQ5VZV4 182 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 FOXI2Q6ZQN5 318 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 COQ8AQ8NI60 647 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 WDR12Q9GZL7 423 aaKnown RBP11.12□□□□□ -0.63
DDX55-202ENST00000354291 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
DDX55-202ENST00000354291 YTHDF2Q9Y5A9 579 aaKnown RBP11.12□□□□□ -0.63
DDX55-202ENST00000354291 ISLRO14498 428 aa11.11□□□□□ -0.63
DDX55-202ENST00000354291 MEOX2P50222 304 aa11.11□□□□□ -0.63
DDX55-202ENST00000354291 XGP55808 180 aa11.11□□□□□ -0.63
DDX55-202ENST00000354291 ID3Q02535 119 aa11.11□□□□□ -0.63
DDX55-202ENST00000354291 BAK1Q16611 211 aa11.11□□□□□ -0.63
DDX55-202ENST00000354291 BPIFCQ8NFQ6 507 aa11.11□□□□□ -0.63
DDX55-202ENST00000354291 SAV1Q9H4B6 383 aaPredicted RBP11.11□□□□□ -0.63
DDX55-202ENST00000354291 MDFICQ9P1T7 246 aa11.11□□□□□ -0.63
DDX55-202ENST00000354291 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
DDX55-202ENST00000354291 CENPXA8MT69 81 aa11.1□□□□□ -0.63
DDX55-202ENST00000354291 SOCS3O14543 225 aa11.1□□□□□ -0.63
DDX55-202ENST00000354291 ADAP1O75689 374 aa11.1□□□□□ -0.63
DDX55-202ENST00000354291 GALR1P47211 349 aa11.1□□□□□ -0.63
DDX55-202ENST00000354291 AKR1C1Q04828 323 aa11.1□□□□□ -0.63
DDX55-202ENST00000354291 LINC00588Q9Y4M8 146 aa11.1□□□□□ -0.63
DDX55-202ENST00000354291 HBE1P02100 147 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 OR4E1P0C645 316 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX55-202ENST00000354291 GDF5OSQ5U4N7 250 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 OR4D5Q8NGN0 318 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 GPR82Q96P67 336 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 C7orf50Q9BRJ6 194 aaKnown RBP11.09□□□□□ -0.63
DDX55-202ENST00000354291 Q9H8V8 135 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 RPRMQ9NS64 109 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 PSENENQ9NZ42 101 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 FLVCR2Q9UPI3 526 aa11.09□□□□□ -0.63
DDX55-202ENST00000354291 ZNF98A6NK75 572 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 H3BP45 60 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 ORM2P19652 201 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 PAX9P55771 341 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 DEFB1P60022 68 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 POLR2GP62487 172 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDX55-202ENST00000354291 CNPY1Q3B7I2 92 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 C4orf46Q504U0 113 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 ACOT7LQ6ZUV0 252 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 OR4B1Q8NGF8 309 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 OR1B1Q8NGR6 318 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 C16orf92Q96LL3 132 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 RSG1Q9BU20 258 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 TMEM147Q9BVK8 224 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 SLC25A22Q9H936 323 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 PTTG2Q9NZH5 202 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 GOLT1BQ9Y3E0 138 aa11.08□□□□□ -0.64
DDX55-202ENST00000354291 LINC00854A0A1B0GVQ3 168 aa11.07□□□□□ -0.64
DDX55-202ENST00000354291 F5H768 121 aa11.07□□□□□ -0.64
DDX55-202ENST00000354291 SMR3BP02814 79 aaPredicted RBP11.07□□□□□ -0.64
DDX55-202ENST00000354291 BTF3P20290 206 aaKnown RBP11.07□□□□□ -0.64
DDX55-202ENST00000354291 PSG9Q00887 426 aa11.07□□□□□ -0.64
DDX55-202ENST00000354291 CLINT1Q14677 625 aa11.07□□□□□ -0.64
DDX55-202ENST00000354291 SMIM8Q96KF7 97 aa11.07□□□□□ -0.64
DDX55-202ENST00000354291 SLC25A32Q9H2D1 315 aa11.07□□□□□ -0.64
DDX55-202ENST00000354291 A0A0J9YX75 114 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 SMCO3A2RU48 225 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 SSSCA1O60232 199 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 IL5P05113 134 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 GATA2P23769 480 aaPredicted RBP11.06□□□□□ -0.64
DDX55-202ENST00000354291 RRN3P1Q2M238 152 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 FAM78BQ5VT40 261 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 TMEM182Q6ZP80 229 aaPredicted RBP11.06□□□□□ -0.64
DDX55-202ENST00000354291 SSX7Q7RTT5 188 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 S100A7AQ86SG5 101 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 ZNF709Q8N972 641 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 SDHCQ99643 169 aaPredicted RBP11.06□□□□□ -0.64
DDX55-202ENST00000354291 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
DDX55-202ENST00000354291 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
DDX55-202ENST00000354291 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
DDX55-202ENST00000354291 ANXA7P20073 488 aaKnown RBP11.05□□□□□ -0.64
DDX55-202ENST00000354291 RAP2BP61225 183 aa11.05□□□□□ -0.64
DDX55-202ENST00000354291 SELENOTP62341 195 aa11.05□□□□□ -0.64
DDX55-202ENST00000354291 CYP2G1PQ6ZSU1 146 aa11.05□□□□□ -0.64
DDX55-202ENST00000354291 SLC35B3Q9H1N7 401 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms