RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 CD24P25063 80 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 CAMPP49913 170 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 LYPD1Q8N2G4 141 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 OR4F17Q8NGA8 305 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 DAZAP1Q96EP5 407 aaKnown RBP17.44■□□□□ 0.38
UPF3A-201ENST00000351487 TRAV30A0A087WSZ9 112 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 TRAV8-1A0A0A6YYK1 113 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 DIRC3C9JPN6 131 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 MRPS12O15235 138 aaKnown RBP17.44■□□□□ 0.38
UPF3A-201ENST00000351487 HES1Q14469 280 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 ZNF562Q6V9R5 426 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 GOLT1AQ6ZVE7 132 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 OR4B1Q8NGF8 309 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 SSBP4Q9BWG4 385 aaPredicted RBP17.44■□□□□ 0.38
UPF3A-201ENST00000351487 SNHG12Q9BXW3 62 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 DCHS2Q6V1P9 2916 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 C16orf54Q6UWD8 224 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 SIGLEC15Q6ZMC9 328 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 RBPMS2Q6ZRY4 209 aaKnown RBP17.43■□□□□ 0.38
UPF3A-201ENST00000351487 IGFBPL1Q8WX77 278 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 FANCD2OSQ96PS1 177 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 IL4P05112 153 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 MRPL52Q86TS9 123 aaKnown RBP17.43■□□□□ 0.38
UPF3A-201ENST00000351487 Q8N6K4 173 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 TMEM75Q8N9X5 138 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 ARPC1AQ92747 370 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 MIEN1Q9BRT3 115 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 PAM16Q9Y3D7 125 aa17.43■□□□□ 0.38
UPF3A-201ENST00000351487 LRBAP50851 2863 aa17.42■□□□□ 0.38
UPF3A-201ENST00000351487 HLA-DRB1P01911 266 aa17.42■□□□□ 0.38
UPF3A-201ENST00000351487 RAB4AP20338 218 aa17.42■□□□□ 0.38
UPF3A-201ENST00000351487 VMO1Q7Z5L0 202 aa17.42■□□□□ 0.38
UPF3A-201ENST00000351487 HRNRQ86YZ3 2850 aaPredicted RBP17.42■□□□□ 0.38
UPF3A-201ENST00000351487 NBASA2RRP1 2371 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 EBI3Q14213 229 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 KLF17Q5JT82 389 aaPredicted RBP17.41■□□□□ 0.38
UPF3A-201ENST00000351487 MINOS1Q5TGZ0 78 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 CIARTQ8N365 385 aaPredicted RBP17.41■□□□□ 0.38
UPF3A-201ENST00000351487 FAM19A2Q8N3H0 131 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 OR2D3Q8NGH3 330 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 MINOS1-NBL1R4GNA1 71 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 M0R143 59 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 GNG7O60262 68 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 C3orf79P0CE67 100 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 COL8A1P27658 744 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 SSTP61278 116 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 S100A7AQ86SG5 101 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 PRNTQ86SH4 94 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 TTC9CQ8N5M4 171 aa17.41■□□□□ 0.38
UPF3A-201ENST00000351487 A0A1W2PRD5 423 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 A0A1W2PRF3 423 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 A0A1W2PRM7 423 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 MFAP4P55083 255 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 NDPQ00604 133 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 DYNAPQ8N1N2 210 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 C17orf77Q96MU5 243 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 PGLYRP4Q96LB8 373 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 ZFP30Q9Y2G7 519 aa17.4■□□□□ 0.38
UPF3A-201ENST00000351487 F8W735 103 aaPredicted RBP17.39■□□□□ 0.37
UPF3A-201ENST00000351487 HSBP1O75506 76 aa17.39■□□□□ 0.37
UPF3A-201ENST00000351487 ZNF414Q96IQ9 312 aa17.39■□□□□ 0.37
UPF3A-201ENST00000351487 ATRXP46100 2492 aa17.39■□□□□ 0.37
UPF3A-201ENST00000351487 NTF3P20783 257 aa17.39■□□□□ 0.37
UPF3A-201ENST00000351487 BORCS7Q96B45 105 aa17.39■□□□□ 0.37
UPF3A-201ENST00000351487 ZNF785A8K8V0 405 aa17.38■□□□□ 0.37
UPF3A-201ENST00000351487 K7EQM0 130 aa17.38■□□□□ 0.37
UPF3A-201ENST00000351487 TOX4O94842 621 aa17.38■□□□□ 0.37
UPF3A-201ENST00000351487 CTRLP40313 264 aa17.38■□□□□ 0.37
UPF3A-201ENST00000351487 FOXA3P55318 350 aaPredicted RBP17.38■□□□□ 0.37
UPF3A-201ENST00000351487 PDE6HQ13956 83 aa17.38■□□□□ 0.37
UPF3A-201ENST00000351487 TACC2O95359 2948 aa17.38■□□□□ 0.37
UPF3A-201ENST00000351487 A0A1W2PPR1 153 aa17.37■□□□□ 0.37
UPF3A-201ENST00000351487 ZFP36P26651 326 aaKnown RBP17.37■□□□□ 0.37
UPF3A-201ENST00000351487 FCGR2BP31994 310 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-201ENST00000351487 NUTF2P61970 127 aaKnown RBP17.37■□□□□ 0.37
UPF3A-201ENST00000351487 S4R3C0 116 aa17.37■□□□□ 0.37
UPF3A-201ENST00000351487 APOHP02749 345 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-201ENST00000351487 RNF224P0DH78 156 aa17.37■□□□□ 0.37
UPF3A-201ENST00000351487 PSG3Q16557 428 aa17.37■□□□□ 0.37
UPF3A-201ENST00000351487 FAM162BQ5T6X4 162 aa17.37■□□□□ 0.37
UPF3A-201ENST00000351487 ZNF705AQ6ZN79 300 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-201ENST00000351487 Q71RC1 249 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-201ENST00000351487 SIRPDQ9H106 197 aa17.37■□□□□ 0.37
UPF3A-201ENST00000351487 RELNP78509 3460 aa17.37■□□□□ 0.37
UPF3A-201ENST00000351487 NCBP2LA6PVI3 153 aaKnown RBP17.36■□□□□ 0.37
UPF3A-201ENST00000351487 NHLH1Q02575 133 aa17.36■□□□□ 0.37
UPF3A-201ENST00000351487 ZC2HC1AQ96GY0 325 aa17.36■□□□□ 0.37
UPF3A-201ENST00000351487 C21orf62Q9NYP8 219 aa17.36■□□□□ 0.37
UPF3A-201ENST00000351487 OVOL3O00110 214 aa17.36■□□□□ 0.37
UPF3A-201ENST00000351487 THYN1Q9P016 225 aa17.36■□□□□ 0.37
UPF3A-201ENST00000351487 PSG8Q9UQ74 426 aa17.36■□□□□ 0.37
UPF3A-201ENST00000351487 HAX1O00165 279 aa17.35■□□□□ 0.37
UPF3A-201ENST00000351487 RNASEKQ6P5S7 137 aaKnown RBP17.35■□□□□ 0.37
UPF3A-201ENST00000351487 URB1-AS1Q96HZ7 61 aa17.35■□□□□ 0.37
UPF3A-201ENST00000351487 FAM181BA6NEQ2 426 aa17.35■□□□□ 0.37
UPF3A-201ENST00000351487 BCL6BQ8N143 479 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-201ENST00000351487 M0QZK8 103 aa17.34■□□□□ 0.37
UPF3A-201ENST00000351487 M0R2Z0 102 aa17.34■□□□□ 0.37
UPF3A-201ENST00000351487 TMEM11P17152 192 aa17.34■□□□□ 0.37
UPF3A-201ENST00000351487 Q56UQ5 140 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms