RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 A0A096LPF7 62 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 GNLYP22749 145 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 RNF166Q96A37 237 aaPredicted RBP9.77□□□□□ -0.85
TRAF3-201ENST00000347662 DYSFO75923 2080 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 IGHV1-2P23083 117 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 PVRIGQ6DKI7 326 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
TRAF3-201ENST00000347662 AQP3Q92482 292 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 IGHG4P01861 327 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 VMO1Q7Z5L0 202 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 WFDC9Q8NEX5 89 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 CFHR1Q03591 330 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 ASPHD2Q6ICH7 369 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 ZNF837Q96EG3 531 aaPredicted RBP9.76□□□□□ -0.85
TRAF3-201ENST00000347662 MSRB2Q9Y3D2 182 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 PSPNO60542 156 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 TMEM144Q7Z5S9 345 aa9.76□□□□□ -0.85
TRAF3-201ENST00000347662 IGHV4-28A0A0C4DH34 117 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-201ENST00000347662 CRLF1O75462 422 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 ZNF660Q6AZW8 331 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-201ENST00000347662 HEATR5AQ86XA9 2040 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 COL4A6Q14031 1691 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 C17orf100A8MU93 164 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 PPBPP02775 128 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 OR10W1Q8NGF6 305 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 HSD52Q0P140 79 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 FAM90A2PQ658T7 463 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-201ENST00000347662 CHCHD1Q96BP2 118 aaKnown RBP9.75□□□□□ -0.85
TRAF3-201ENST00000347662 CHAC1Q9BUX1 264 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 MYLKQ15746 1914 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 C15orf32Q32M92 178 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 BCL6BQ8N143 479 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-201ENST00000347662 Q96M66 194 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 SAA2-SAA4A0A096LPE2 208 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 SAA2P0DJI9 122 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-201ENST00000347662 IGLV3-21P80748 117 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-201ENST00000347662 ZNF329Q86UD4 541 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 LINC00312Q9Y6C7 94 aa9.75□□□□□ -0.85
TRAF3-201ENST00000347662 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 FOXG1P55316 489 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-201ENST00000347662 EP400Q96L91 3159 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 GAGE12JA6NER3 117 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 TIMM23O14925 209 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 HLA-DQB1P01920 261 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 OR9G9P0C7N8 305 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 GAGE1Q13065 139 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 GAGE4Q13068 117 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 GAGE5Q13069 117 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 GAGE6Q13070 117 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 TEX38Q6PEX7 206 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 PLXND1Q9Y4D7 1925 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 IGHV2OR16-5A0A0B4J2B6 119 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 SELLP14151 372 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 BRD3OSQ6XYD6 125 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 D6R8Y8 96 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 KLRD1Q13241 179 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 RBM38Q9H0Z9 239 aaKnown RBP9.74□□□□□ -0.85
TRAF3-201ENST00000347662 MED13Q9UHV7 2174 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 MBD3L4A6NDZ8 208 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-201ENST00000347662 MBD3L3A6NE82 208 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-201ENST00000347662 MBD3L5A6NJ08 208 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-201ENST00000347662 FSTP19883 344 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 MBD3L2Q8NHZ7 208 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-201ENST00000347662 C12orf77C9JDV5 145 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 PLA2G10O15496 165 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 RPL18AQ02543 176 aaKnown RBP9.74□□□□□ -0.85
TRAF3-201ENST00000347662 Q9HAA7 133 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 DEPPQ9NTK1 212 aa9.74□□□□□ -0.85
TRAF3-201ENST00000347662 IQCF6A8MYZ5 107 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 ZNF708P17019 499 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 TCF15Q12870 199 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 TMEM133Q9H2Q1 129 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 SPRR3Q9UBC9 169 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 TINCRA0A1B0GVN0 87 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 DSCR9P59020 149 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 C14orf178Q8N769 122 aaPredicted RBP9.73□□□□□ -0.85
TRAF3-201ENST00000347662 NTN3O00634 580 aaPredicted RBP9.73□□□□□ -0.85
TRAF3-201ENST00000347662 VWC2Q2TAL6 325 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 IGKV2D-24A0A075B6R9 120 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 IGKV1OR2-108A0A075B7D4 117 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 PRSS29PA6NIE9 313 aa9.73□□□□□ -0.85
TRAF3-201ENST00000347662 TRBV25-1A0A075B6N4 114 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 PINLYPA6NC86 204 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 EXOC3-AS1Q8N2X6 119 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 A6NNC1 897 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 RS1O15537 224 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 LINC00477Q96M19 166 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 TFF1P04155 84 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 FOXF2Q12947 444 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 C1orf43Q9BWL3 253 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 IGKV1D-43A0A0B4J1Z2 117 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 PMS2P5A8MQ11 134 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 H3BUX3 64 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 PSG7Q13046 419 aa9.72□□□□□ -0.85
TRAF3-201ENST00000347662 GOLGB1Q14789 3259 aaKnown RBP9.72□□□□□ -0.85
TRAF3-201ENST00000347662 KLF17Q5JT82 389 aaPredicted RBP9.72□□□□□ -0.85
TRAF3-201ENST00000347662 XCL2Q9UBD3 114 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms