RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 HERV-K104P63124 156 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 EBLN2Q6P2I7 272 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 LTBP1Q14766 1721 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 NPFFO15130 113 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 FOXA2Q9Y261 457 aaPredicted RBP11.28□□□□□ -0.6
TRIO-202ENST00000344204 AGFG2O95081 481 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 IGKV1D-43A0A0B4J1Z2 117 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 SRXN1Q9BYN0 137 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 TAX1BP3O14907 124 aa11.27□□□□□ -0.6
TRIO-202ENST00000344204 RBMY1BA6NDE4 496 aaKnown RBP11.27□□□□□ -0.61
TRIO-202ENST00000344204 RBMY1EA6NEQ0 496 aaKnown RBP11.27□□□□□ -0.61
TRIO-202ENST00000344204 RBMY1DP0C7P1 496 aaKnown RBP11.27□□□□□ -0.61
TRIO-202ENST00000344204 RBMY1A1P0DJD3 496 aaKnown RBP11.27□□□□□ -0.61
TRIO-202ENST00000344204 RBMY1CP0DJD4 496 aa11.27□□□□□ -0.61
TRIO-202ENST00000344204 PSG8Q9UQ74 426 aa11.27□□□□□ -0.61
TRIO-202ENST00000344204 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.61
TRIO-202ENST00000344204 K7EQS6 105 aa11.27□□□□□ -0.61
TRIO-202ENST00000344204 TAL2Q16559 108 aa11.27□□□□□ -0.61
TRIO-202ENST00000344204 C5orf47Q569G3 176 aa11.27□□□□□ -0.61
TRIO-202ENST00000344204 V9GYV3 84 aa11.27□□□□□ -0.61
TRIO-202ENST00000344204 FXYD7P58549 80 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 OR9G1Q8NH87 305 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 REPIN1Q9BWE0 567 aaKnown RBP11.26□□□□□ -0.61
TRIO-202ENST00000344204 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
TRIO-202ENST00000344204 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
TRIO-202ENST00000344204 SCRT1Q9BWW7 348 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 SIGLEC8Q9NYZ4 499 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 IGHV3-72A0A0B4J1Y9 119 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 PAX1P15863 534 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 C15orf53Q8NAA6 179 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 CEACAM4O75871 244 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 MAGEA5P43359 124 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 TMEM158Q8WZ71 300 aa11.26□□□□□ -0.61
TRIO-202ENST00000344204 LRP4O75096 1905 aa11.25□□□□□ -0.61
TRIO-202ENST00000344204 PRSS29PA6NIE9 313 aa11.25□□□□□ -0.61
TRIO-202ENST00000344204 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
TRIO-202ENST00000344204 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
TRIO-202ENST00000344204 MYMXA0A1B0GTQ4 84 aa11.25□□□□□ -0.61
TRIO-202ENST00000344204 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
TRIO-202ENST00000344204 LILRA6Q6PI73 481 aa11.25□□□□□ -0.61
TRIO-202ENST00000344204 DUSP15Q9H1R2 295 aaPredicted RBP11.25□□□□□ -0.61
TRIO-202ENST00000344204 SAA2P0DJI9 122 aaPredicted RBP11.25□□□□□ -0.61
TRIO-202ENST00000344204 AMTNQ6UX39 209 aa11.25□□□□□ -0.61
TRIO-202ENST00000344204 C2CD4DB7Z1M9 353 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 J3QW42 95 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 IGKV3-11P04433 115 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 AMN1Q8IY45 258 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 CYYR1Q96J86 154 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 RNASE4P34096 147 aaKnown RBP11.24□□□□□ -0.61
TRIO-202ENST00000344204 LYZL1Q6UWQ5 148 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 OR13A1Q8NGR1 328 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 ZNF492Q9P255 531 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 TNFRSF18Q9Y5U5 241 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 WBP1Q96G27 269 aa11.24□□□□□ -0.61
TRIO-202ENST00000344204 UPK2O00526 184 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 LGALS9BQ3B8N2 356 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 TCF15Q12870 199 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 TRAV17A0A0B4J275 112 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 RSPO4Q2I0M5 234 aaPredicted RBP11.23□□□□□ -0.61
TRIO-202ENST00000344204 Q6ZS49 121 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 CD69Q07108 199 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 KLF14Q8TD94 323 aaPredicted RBP11.23□□□□□ -0.61
TRIO-202ENST00000344204 HES7Q9BYE0 225 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 C15orf62A8K5M9 175 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 DUTP33316 252 aaKnown RBP11.23□□□□□ -0.61
TRIO-202ENST00000344204 CT55Q8WUE5 264 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 GUSBP11Q6P575 273 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 SPXQ9BT56 116 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 UTF1Q5T230 341 aa11.23□□□□□ -0.61
TRIO-202ENST00000344204 SCARF2Q96GP6 870 aaPredicted RBP11.23□□□□□ -0.61
TRIO-202ENST00000344204 SAA1P0DJI8 122 aaPredicted RBP11.22□□□□□ -0.61
TRIO-202ENST00000344204 ZNHIT1O43257 154 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 SH2D6Q7Z4S9 175 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 WIPF2Q8TF74 440 aaPredicted RBP11.22□□□□□ -0.61
TRIO-202ENST00000344204 MRPL20Q9BYC9 149 aaKnown RBP11.22□□□□□ -0.61
TRIO-202ENST00000344204 SHISA5Q8N114 240 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 ZNF114Q8NC26 417 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 OR11H6Q8NGC7 330 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 SLC25A20O43772 301 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 ITLN1Q8WWA0 313 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 TRGV8A0A0C4DH27 118 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 AHRRA9YTQ3 701 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 TMEM258P61165 79 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 ANKRD29Q8N6D5 301 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 ZNF726P1Q15940 193 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 NRN1LQ496H8 165 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 TM4SF5O14894 197 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 NPIPB5A8MRT5 1133 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 C12orf74Q32Q52 190 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
TRIO-202ENST00000344204 ZNF501Q96CX3 271 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms