RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.57
CXCL12-201ENST00000343575 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.57
CXCL12-201ENST00000343575 MRPL36Q9P0J6 103 aaKnown RBP11.52□□□□□ -0.57
CXCL12-201ENST00000343575 WDR83OSQ9Y284 106 aa11.52□□□□□ -0.57
CXCL12-201ENST00000343575 IGHG2P01859 326 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 ADMP35318 185 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 CRIP2P52943 208 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-201ENST00000343575 CD69Q07108 199 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 TREML4Q6UXN2 200 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 FANCD2OSQ96PS1 177 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 DUX5Q96PT3 197 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 IL36BQ9NZH7 164 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 HMGB3O15347 200 aaKnown RBP11.51□□□□□ -0.57
CXCL12-201ENST00000343575 NDUFB4O95168 129 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 CXorf1O96002 111 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 MT-CO2P00403 227 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 MT-ND6P03923 174 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 OPRK1P41145 380 aa11.51□□□□□ -0.57
CXCL12-201ENST00000343575 Q71RC1 249 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-201ENST00000343575 LSM4Q9Y4Z0 139 aaKnown RBP11.51□□□□□ -0.57
CXCL12-201ENST00000343575 IGKV1OR2-108A0A075B7D4 117 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 IGHV3-48P01763 117 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 SUB1P53999 127 aaKnown RBP eCLIP11.5□□□□□ -0.57
CXCL12-201ENST00000343575 Q6ZWC4 215 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 OR5T1Q8NG75 326 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 OR2T6Q8NHC8 308 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 RNF2Q99496 336 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 ESM1Q9NQ30 184 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 ZNF586Q9NXT0 402 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 LINC00527Q9UJ94 153 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 ARL2-SNX15V9GYD0 113 aa11.5□□□□□ -0.57
CXCL12-201ENST00000343575 IGLV11-55A0A075B6I3 123 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 C9JCJ5 164 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 IGF1P05019 195 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 ZNF90Q03938 601 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 ECSCRQ19T08 205 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 WDR73Q6P4I2 378 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 UNQ5815/PRO19632Q6UWF5 114 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 ZFP30Q9Y2G7 519 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 FNDC10F2Z333 226 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 I3L2K1 104 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 HNF1AP20823 631 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 KLK9Q2XQG4 91 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 CACNG8Q8WXS5 425 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 GNB1LQ9BYB4 327 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 KLK9Q9UKQ9 250 aa11.49□□□□□ -0.57
CXCL12-201ENST00000343575 FN1P02751 2386 aaKnown RBP11.48□□□□□ -0.57
CXCL12-201ENST00000343575 F8P00451 2351 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 IGHV3-21A0A0B4J1V1 117 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 K7EIM0 57 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 STAG3L2P0CL84 134 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 STAG3L3P0CL85 134 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 BAGE3Q86Y29 109 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 BAGE2Q86Y30 109 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 FAM110DQ8TAY7 271 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-201ENST00000343575 C11orf52Q96A22 123 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 UHRF2Q96PU4 802 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 MRPL18Q9H0U6 180 aaKnown RBP11.48□□□□□ -0.57
CXCL12-201ENST00000343575 NPVFQ9HCQ7 196 aa11.48□□□□□ -0.57
CXCL12-201ENST00000343575 NUPR1O60356 82 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 DEFA4P12838 97 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 PPIFP30405 207 aaKnown RBP11.47□□□□□ -0.57
CXCL12-201ENST00000343575 ATP5G3P48201 142 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 OR10J3Q5JRS4 329 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 TMEM86BQ8N661 226 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 MGST2Q99735 147 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 SAMD10Q9BYL1 202 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 SLC45A2Q9UMX9 530 aa11.47□□□□□ -0.57
CXCL12-201ENST00000343575 TRAV41A0A0B4J266 112 aa11.46□□□□□ -0.57
CXCL12-201ENST00000343575 DNAJC9-AS1A6NH13 148 aa11.46□□□□□ -0.57
CXCL12-201ENST00000343575 SERF1AO75920 110 aa11.46□□□□□ -0.57
CXCL12-201ENST00000343575 ZNF702PQ9H963 129 aa11.46□□□□□ -0.57
CXCL12-201ENST00000343575 AURKAIP1Q9NWT8 199 aaPredicted RBP11.46□□□□□ -0.57
CXCL12-201ENST00000343575 NSD1Q96L73 2696 aaPredicted RBP11.46□□□□□ -0.57
CXCL12-201ENST00000343575 IGKV1D-37A0A075B6S9 117 aa11.46□□□□□ -0.58
CXCL12-201ENST00000343575 INAFM1C9JVW0 142 aa11.46□□□□□ -0.58
CXCL12-201ENST00000343575 NPSP0C0P6 89 aa11.46□□□□□ -0.58
CXCL12-201ENST00000343575 OR10J4P0C629 311 aa11.46□□□□□ -0.58
CXCL12-201ENST00000343575 RPEL1Q2QD12 228 aa11.46□□□□□ -0.58
CXCL12-201ENST00000343575 NPIPB3Q92617 1050 aa11.46□□□□□ -0.58
CXCL12-201ENST00000343575 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.58
CXCL12-201ENST00000343575 CDC42EP3Q9UKI2 254 aa11.46□□□□□ -0.58
CXCL12-201ENST00000343575 CORTO00230 105 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 NDUFB8O95169 186 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 SRD5A1P18405 259 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 UBE2G2P60604 165 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 CFHR3Q02985 330 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 KLHDC1Q8N7A1 406 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 TMEM116Q8NCL8 245 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 OR1L6Q8NGR2 347 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 TP53TG3Q9ULZ0 132 aa11.45□□□□□ -0.58
CXCL12-201ENST00000343575 F8W735 103 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-201ENST00000343575 SUMO1P63165 101 aaKnown RBP11.44□□□□□ -0.58
CXCL12-201ENST00000343575 TEPPQ6URK8 271 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 Q8N2B8 174 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 VN1R17PQ8TDU5 208 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 SLC35E1Q96K37 410 aa11.44□□□□□ -0.58
CXCL12-201ENST00000343575 GGTLC1Q9BX51 225 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms